BAC Information

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BAC

Clone NameB6Ng01-264G16
Chromosome19 (Build37)
Map Location 10,462,020 - 10,625,496
singlet/doubletdoublet
Overlap geneSyt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik
Upstream geneLOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla
Downstream geneTmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264G16.bB6Ng01-264G16.g
ACCGA068328GA068329
length2551,085
definitionB6Ng01-264G16.b B6Ng01-264G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,462,020 - 10,462,274)(10,624,396 - 10,625,496)
sequence
ttgggtgcatgatgaatgggggacagagcagtccttgatcacagagtgag
ggctgagatttctggccactggggaaatacagacccaactgtccacgtgc
cttttccccacttccgttttattagactcttcaatcccaggaagtatgtt
cttcaccagaaccgtcttagagaagttttgctggggaattttccttatct
atttctcaaccggaaaagctgtgggtggaggtgaatatgtgtgtgtgtgt
gtgtg
ggtgacaacacatatccatctggtacttcagccacactggtgaaaagtgg
taggtcgagctaacctgggaaaggtttgtgtggtttttcctcagtgcgga
catttgggcgctgagcacctacctgaggccagtggcaccatctttaaagc
gggatcatcagcaggagactctttccttttgttgtagggaggggcaaggc
tgtccccatcttggtgtttctaacagcttcctaatgatctcaagttctct
tctgtggtcatcatggccagagcaccttgtgtggaccttctagttttgtt
tggcttccagcagaacctgagccacagcactctgtgcacgtacatctgtc
ctacatgaccatggagagcctcataatggtgggctcttgggctgattcca
atgtgtgttctccacgctgctccacctgcccccatcctgctcaaagagat
ggtgatctagaacccatttagtagtttatagtagtatttttctattctga
tcatgaagcaaacacaaaatttttaataaaagtattttctgatacagggc
tggttgattttctcctatgacacctctttagatttcctttcttctaagtg
agggcacagactatcccaacagtgttttctgaggctgtgtttagtggtaa
gctgggacacaaagacactcacggagtgtcccaccaatcctttcctctca
tgcccaagttacagcctgaatcccagagcactgcctgtttgtcatcttca
gttctttggcaagactgtaaatgctcttctctgcaagtctccttgtatct
aaattctttccagcataggctatgcataattagacattgaaaagtgtatt
ctaaacctgaccaagatcttagagttaacttaaaagaacatgtatcggtc
agatcttactaagcattgccatgtattttatccaggaagctactatgagt
aatgaagaattcttacttcaggaagccttgaggtcagtcttctgtgtcag
agatctggaatattgttttctagactgctttttaaaaagaaaaaagcttc
ctagctttcattctatggttcacagcccatgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10462020_10462274
seq2: B6Ng01-264G16.b_53_307

seq1  TTGGGTGCATGATGAATGGGGGACAGAGCAGTCCTTGATCACAGAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGCATGATGAATGGGGGACAGAGCAGTCCTTGATCACAGAGTGAG  50

seq1  GGCTGAGATTTCTGGCCACTGGGGAAATACAGACCCAACTGTCCACGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGATTTCTGGCCACTGGGGAAATACAGACCCAACTGTCCACGTGC  100

seq1  CTTTTCCCCACTTCCGTTTTATTAGACTCTTCAATCCCAGGAAGTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCACTTCCGTTTTATTAGACTCTTCAATCCCAGGAAGTATGTT  150

seq1  CTTCACCAGAACCGTCTTAGAGAAGTTTTGCTGGGGAATTTTCCTTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCAGAACCGTCTTAGAGAAGTTTTGCTGGGGAATTTTCCTTATCT  200

seq1  ATTTCTCAACCGGAAAAGCTGTGGGTGGAGGTGAATATGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAACCGGAAAAGCTGTGGGTGGAGGTGAATATGTGTGTGTGTGT  250

seq1  GTGTG  255
      |||||
seq2  GTGTG  255

seq1: chr19_10624396_10625496
seq2: B6Ng01-264G16.g_79_1163 (reverse)

seq1  ACTGCATTGGGCTGTGGAACCCATAGAATGAAAGCTTTAAGAAAGCTTTT  50
      |||||| |||||||||  | ||||||||||||||||   || ||||  ||
seq2  ACTGCA-TGGGCTGTG--AACCATAGAATGAAAGCT---AGGAAGC--TT  42

seq1  TTTTCTTTTTAAAAAAAGGCAGTCTAGGAAAACATATTCCAGGATCCTCC  100
      |||||||||||||||   ||||||||| |||  |||||||| ||||   |
seq2  TTTTCTTTTTAAAAA---GCAGTCTAGAAAACAATATTCCA-GATC--TC  86

seq1  TGACACAG-AGACTGACCTCAAGGCTTCCTGAAGT-AGATTCTTTCATTA  148
      |||||||| |||||||||||||||||||||||||| ||| |  |||||||
seq2  TGACACAGAAGACTGACCTCAAGGCTTCCTGAAGTAAGAATTCTTCATTA  136

seq1  CTCATAGTAGCTTCCTGGGATAAAATACATGGCAATGCTTAGTAAGATCT  198
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  CTCATAGTAGCTTCCT-GGATAAAATACATGGCAATGCTTAGTAAGATC-  184

seq1  TGACCGATACATGTTTCTTTTAAGTTAACTCTAAAGATCTTGGTCAGGTT  248
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TGACCGATACATG-TTCTTTTAAGTTAACTCT-AAGATCTTGGTCAGGTT  232

seq1  TAGAATACACTTTTCAATGTCTAATTATGCATAGCCTATGCTGGAAAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATACACTTTTCAATGTCTAATTATGCATAGCCTATGCTGGAAAGAA  282

seq1  TTTAGATACAAGGAGACTTGCAGAGAAGAGCATTTACAGTCTTGCCAAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATACAAGGAGACTTGCAGAGAAGAGCATTTACAGTCTTGCCAAAG  332

seq1  AACTGAAGATGACAAACAGGCAGTGCTCTGGGATTCAGGCTGTAACTTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGATGACAAACAGGCAGTGCTCTGGGATTCAGGCTGTAACTTGG  382

seq1  GCATGAGAGGAAAGGATTGGTGGGACACTCCGTGAGTGTCTTTGTGTCCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAGGAAAGGATTGGTGGGACACTCCGTGAGTGTCTTTGTGTCCC  432

seq1  AGCTTACCACTAAACACAGCCTCAGAAAACACTGTTGGGATAGTCTGTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACCACTAAACACAGCCTCAGAAAACACTGTTGGGATAGTCTGTGC  482

seq1  CCTCACTTAGAAGAAAGGAAATCTAAAGAGGTGTCATAGGAGAAAATCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTTAGAAGAAAGGAAATCTAAAGAGGTGTCATAGGAGAAAATCAA  532

seq1  CCAGCCCTGTATCAGAAAATACTTTTATTAAAAATTTTGTGTTTGCTTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTGTATCAGAAAATACTTTTATTAAAAATTTTGTGTTTGCTTCA  582

seq1  TGATCAGAATAGAAAAATACTACTATAAACTACTAAATGGGTTCTAGATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAATAGAAAAATACTACTATAAACTACTAAATGGGTTCTAGATC  632

seq1  ACCATCTCTTTGAGCAGGATGGGGGCAGGTGGAGCAGCGTGGAGAACACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTTTGAGCAGGATGGGGGCAGGTGGAGCAGCGTGGAGAACACA  682

seq1  CATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATG  732

seq1  TAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAG  782

seq1  CCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCCATGATGACCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCCATGATGACCAC  832

seq1  AGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATGGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATGGGG  882

seq1  ACAGCCTTGCCCCTCCCTACAACAAAAGGAAAGAGTCTCCTGCTGATGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTGCCCCTCCCTACAACAAAAGGAAAGAGTCTCCTGCTGATGAT  932

seq1  CCCGCTTTAAAGATGGTGCCACTGGCCTCAGGTAGGTGCTCAGCGCCCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTTTAAAGATGGTGCCACTGGCCTCAGGTAGGTGCTCAGCGCCCAA  982

seq1  ATGTCCGCACTGAGGAAAAACCACACAAACCTTTCCCAGGTTAGCTCGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCGCACTGAGGAAAAACCACACAAACCTTTCCCAGGTTAGCTCGAC  1032

seq1  CTACCACTTTTCACCAGTGTGGCTGAAGTACCAGATGGATATGTGTTGTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACTTTTCACCAGTGTGGCTGAAGTACCAGATGGATATGTGTTGTC  1082

seq1  ACC  1101
      |||
seq2  ACC  1085