BAC Information

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BAC

Clone NameB6Ng01-267O06
Chromosome19 (Build37)
Map Location 9,615,367 - 9,616,451
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666612, EG623402, Slc22a8, Slc22a6, Chrm1, Slc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2, Gng3, Bscl2, 1110067I12Rik, D19Ertd721e, AI462493, 1810009A15Rik, Ints5, Ganab, B3gat3, Rom1, Eml3, Mta2, Tut1, Eef1g, Ahnak, Scgb1a1, Asrgl1, EG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143
Downstream geneLOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267O06.bB6Ng01-267O06.g
ACCGA070894GA070895
length1,0821,160
definitionB6Ng01-267O06.b B6Ng01-267O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgagtacatgaattcactgaggagtcataacatcctcaatga
aataaatacctacaaacatgcctgtccaaaatttatttctttagatgtga
taaaatacccttacagaaaaaaatctaagggagaaagaatttattttagc
tcatagctcacagtacagtccataactgtgggatacacataagaagcttg
gagcagttatttacttcatacccacagaggagaaagtaaagtatgtatgc
acatttacttctgttttgattgtactcaggttgatttctcagttaattca
aaatactctacctgagaagggtattgccttctaggacttttcagatctat
tagcttcatgaagataaactccaacagacttgtgtccaagccaatccaat
gtaaacaattaaagctatcttccaggtgagtgtagactgtatcaaggtgg
caatcacctaagcaaagtgcagcaagacatccacatgaaacatttaaaac
ttggaagaaaatgaccaagataatagtaattaggaaaaccacctaatctc
atgaatcagcaaaatatatgttgtgaaaatacccttgttaaaatcaaatc
aaaacagagcaaaacctaaagagtgaaaggaatttctatcaagaaataaa
ttaaagactttctagaatttaacaaaaatgaagacacaacatatcaaaac
ttatgggacacaatgaaacaaagctaagagaaaaaaatcatagcatcgag
tgtcttcatagaggattgtaaaaatcctatactagcaaatttaaagttcc
agaatactgaagaatagactgcagaaaataaccaacttcagtcactgaaa
tcaagcaattaaaaccaaagagaattggtaaagatcttttcccaatctgt
tgggtgccatttttgtcctattgacagtgtcctttgccctatagaagctt
tgggaatttataagtccaatttgtctattgttgatcttagagcataattc
cattagtattccattcaggaaattttcctctgtgtccatgtgtcgaggct
tcttccccactctttctctatagttcagtgta
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tgaaatgctttctctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacattgatggatttctgtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgtttttggattccgttagcaagaactttattgaggatttttgc
atcaatattcataagggatattggtctgaagttctctatctttgtggggt
ctttttgtggtttaggtataagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaactgg
gattagatcttctttgaaggtctgatagaactctgcacgaaacccatctg
gccctgggctttttttggttgggagactattaatgactgattctatttct
ttgggggatatcgggctgtttagatcattaacctggtcttgattcaactt
tggtacctggtatctgtctagaaacttctccatttcatccaggttctcaa
gttttgttgagtataaccctttgtagaaggatctgatggtgttttggatt
tctttgggatctgtttttatgtctcccttttcatttctaattttgttaat
tagaatgctttccctgtgccctctagtgagtctggctaagggtttgtcta
tcttgttgattttctcaaagaaccagctcctcctttggttgattcttttg
aatagttcttcttgtttccacttggttgttttcaccactgagtttgatta
tttctttgcatctactccctcttgggtgaatttgcttccctttgttctag
agctttttaggtgtgttgtcaagctgctattgtatgctctctctagtttt
cttttggagcacttcagagctatgagttttccctcttagaaatgctttca
ttgtgtcccattagtttgggtttgaattggcttcattttcatttgaactt
ctagcaagtccctaatttctttctctttattccttccttggaccaatgta
tcactaaaaaaagtgtggtccagttcacataatgtttggcttctatacat
ttactgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_9615367_9616451
seq2: B6Ng01-267O06.b_48_1129

seq1  GAATTCAATGAGTACATGAATTCACTGAGGAGTCATAACATCCTCAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAGTACATGAATTCACTGAGGAGTCATAACATCCTCAATGA  50

seq1  AATAAATACCTACAAACATGCCTGTCCAAAATTTATTTCTTTAGATGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACCTACAAACATGCCTGTCCAAAATTTATTTCTTTAGATGTGA  100

seq1  TAAAATACCCTTACAGAAAAAAATCTAAGGGAGAAAGAATTTATTTTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACCCTTACAGAAAAAAATCTAAGGGAGAAAGAATTTATTTTAGC  150

seq1  TCATAGCTCACAGTACAGTCCATAACTGTGGGATACACATAAGAAGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCTCACAGTACAGTCCATAACTGTGGGATACACATAAGAAGCTTG  200

seq1  GAGCAGTTATTTACTTCATACCCACAGAGGAGAAAGTAAAGTATGTATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTATTTACTTCATACCCACAGAGGAGAAAGTAAAGTATGTATGC  250

seq1  ACATTTACTTCTGTTTTGATTGTACTCAGGTTGATTTCTCAGTTAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACTTCTGTTTTGATTGTACTCAGGTTGATTTCTCAGTTAATTCA  300

seq1  AAATACTCTACCTGAGAAGGGTATTGCCTTCTAGGACTTTTCAGATCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCTACCTGAGAAGGGTATTGCCTTCTAGGACTTTTCAGATCTAT  350

seq1  TAGCTTCATGAAGATAAACTCCAACAGACTTGTGTCCAAGCCAATCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCATGAAGATAAACTCCAACAGACTTGTGTCCAAGCCAATCCAAT  400

seq1  GTAAACAATTAAAGCTATCTTCCAGGTGAGTGTAGACTGTATCAAGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAATTAAAGCTATCTTCCAGGTGAGTGTAGACTGTATCAAGGTGG  450

seq1  CAATCACCTAAGCAAAGTGCAGCAAGACATCCACATGAAACATTTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCTAAGCAAAGTGCAGCAAGACATCCACATGAAACATTTAAAAC  500

seq1  TTGGAAGAAAATGACCAAGATAATAGTAATTAGGAAAACCACCTAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAAAATGACCAAGATAATAGTAATTAGGAAAACCACCTAATCTC  550

seq1  ATGAATCAGCAAAATATATGTTGTGAAAATACCCTTGTTAAAATCAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCAGCAAAATATATGTTGTGAAAATACCCTTGTTAAAATCAAATC  600

seq1  AAAACAGAGCAAAACCTAAAGAGTGAAAGGAATTTCTATCAAGAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAGCAAAACCTAAAGAGTGAAAGGAATTTCTATCAAGAAATAAA  650

seq1  TTAAAGACTTTCTAGAATTTAACAAAAATGAAGACACAACATATCAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGACTTTCTAGAATTTAACAAAAATGAAGACACAACATATCAAAAC  700

seq1  TTATGGGACACAATGAAACAAAGCTAAGAGAAAAAAATCATAGCATCGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGACACAATGAAACAAAGCTAAGAGAAAAAAATCATAGCATCGAG  750

seq1  TGTCTTCATAGAGGATTGTAAAAATCCTATACTAGCAAATTTAAAGTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCATAGAGGATTGTAAAAATCCTATACTAGCAAATTTAAAGTTCC  800

seq1  AGAATACTGAAGAATAGACTGCAGAAAATAACCAACTTCAGTCACTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTGAAGAATAGACTGCAGAAAATAACCAACTTCAGTCACTGAAA  850

seq1  TCAAGCAATTAAAACCAAAGAGAATTGGTAAAGATCTTTTCCCAATCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAATTAAAACCAAAGAGAATTGGTAAAGATCTTTTCCCAATCTGT  900

seq1  TGGGTGCCATTTTTGTCCTATTGACAGTGTCCTTTGCCCTATAGAAGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCATTTTTGTCCTATTGACAGTGTCCTTTGCCCTATAGAAGCTT  950

seq1  TGGAATTTTATAAGGTCCAATTTGTCTATTGTTGATCTTAGAGCATAA-T  999
      ||| | ||||||| |||||||||||||||||||||||||||||||||| |
seq2  TGGGAATTTATAA-GTCCAATTTGTCTATTGTTGATCTTAGAGCATAATT  999

seq1  CCATTAGTATTCCATTCAGGAAATTTTCCTCTGTGTCCATGTGTTCGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCATTAGTATTCCATTCAGGAAATTTTCCTCTGTGTCCATGTG-TCGAGG  1048

seq1  C-TCTTCCCCACTCTTTCTTCTATTAGTTTCAGTGTA  1085
      | |||||||||||||||| |||| ||| |||||||||
seq2  CTTCTTCCCCACTCTTTC-TCTA-TAG-TTCAGTGTA  1082