BAC Information

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BAC

Clone NameB6Ng01-272K17
Chromosome19 (Build37)
Map Location 13,084,824 - 13,170,878
singlet/doubletdoublet
Overlap geneOlfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457
Upstream geneGA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451
Downstream geneEG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272K17.bB6Ng01-272K17.g
ACCGA074438GA074439
length8881,086
definitionB6Ng01-272K17.b B6Ng01-272K17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,084,824 - 13,085,711)(13,169,795 - 13,170,878)
sequence
gaattctcaaccgagaagcacttatctttgattaataagaatagtccaaa
tagcaatgatatttccatggcaaatgagaaacacaaagttttgattttag
gttagataaatttctatagatctcctgggtgtaagcacagtttcctttaa
ccccattggagttcacctctgtgtacaccagccactctatggcatacttt
cttaaactatgggttgcacaaccctacagagaccttataactgaatgttg
ggggctgtgaaaaaggtagcagcataagagttttctaaacatctaggatc
caaaaattaatcaaaatcacatgtaataatacctaaggcatttctggaaa
tacttaccttggtctattgccaagccccccccccccccagccccaagaaa
tgttcaatatccttagtcatcagtgaaataaaaatgaaactgactctgag
ataccacctcacaccagtcagtatgattaagaaaaaaatctctggtgaca
gtagatgctggcaaggatgtggagaaagacaaacactctttcattgctag
tgggattgcaagctggtacaacaattctggaaattagtctggtgattcct
cagaaaattggaactagttttacttgaagactcagctataccctgcttgt
tatctattaagaaaaaggacatcattcgtttttcaggcaaatggatggaa
tttgaaaccatcatcctgagtgaggtaacccagtcgcaaaataacacaca
cggatattagtcataaaaagatcaggatacctaagatacaactcatagac
catatgaaatccaagaagaaggaagactacaccaagggtggatactacaa
tattactcagaagaggcaagaaaataatccagggaagt
tagtcatagtatttattttagaggacacacatttctaggcccttgtttcc
caggacaaaatattgaacaaggagcatgtgtttagaaatagaaagagaag
tctggaattctagtaatgctgagtttgtgccaaagtacacatgtacatat
aatttctcttatcttcaatttatctaaaattctgcttggagtctcatgct
tggaaatcacaatgggttaaataaaatcgagaacccaaagcaaagactag
cattttacacttaaaatatgaataaattaccaaactttgtgttccataac
ttaaatgaaaacaataacaattctaatataattaagaaaatatgtggaat
ggacttcacctagagaagaccttggaaacaaaacaacatagaaagaaaat
ttttattatactcagaactgaattggaaatcattcacacatcactttaat
cacattcattattaaataatctcaaattctgtacatgaactacaaaaatt
taaagttgggtaacaacataggaaaacaattaataatcactaaagtttgg
catatctaaccttttatataactaaaatgccaaatttaatttgggaaaag
tttattttctatgtaatttcaaagtaccaattattgttcaaccaagtcat
agttccacacttatgcatttctattttgattcagcttctttatcatcatg
gttctcttttccaatagatgtgaatattctagtgattaaaagatgtctct
gatggagaataatacaaaagtgacagagtttcttctgctgggactcacca
atgacccagaattacagcttcccctcttcttgatatttctcctcatttac
accatcaccctggtgggaaatctggggctgatcctgctgattgtcctgga
ctcttgtctccacactcccatgtacatttttctaggtaatctgtccttgg
ttgatttttgttactccttcagctgtcaccacctagtgtcatgactgagc
ttctaataggaaaaaggtcatttcctacatgactgtgctgctcaaacgtt
tctttttttgtagcaatctgtactgttgaaaattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13084824_13085711
seq2: B6Ng01-272K17.b_47_934

seq1  GAATTCTCAACCGAGAAGCACTTATCTTTGATTAATAAGAATAGTCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACCGAGAAGCACTTATCTTTGATTAATAAGAATAGTCCAAA  50

seq1  TAGCAATGATATTTCCATGGCAAATGAGAAACACAAAGTTTTGATTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGATATTTCCATGGCAAATGAGAAACACAAAGTTTTGATTTTAG  100

seq1  GTTAGATAAATTTCTATAGATCTCCTGGGTGTAAGCACAGTTTCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATAAATTTCTATAGATCTCCTGGGTGTAAGCACAGTTTCCTTTAA  150

seq1  CCCCATTGGAGTTCACCTCTGTGTACACCAGCCACTCTATGGCATACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTGGAGTTCACCTCTGTGTACACCAGCCACTCTATGGCATACTTT  200

seq1  CTTAAACTATGGGTTGCACAACCCTACAGAGACCTTATAACTGAATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACTATGGGTTGCACAACCCTACAGAGACCTTATAACTGAATGTTG  250

seq1  GGGGCTGTGAAAAAGGTAGCAGCATAAGAGTTTTCTAAACATCTAGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGTGAAAAAGGTAGCAGCATAAGAGTTTTCTAAACATCTAGGATC  300

seq1  CAAAAATTAATCAAAATCACATGTAATAATACCTAAGGCATTTCTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTAATCAAAATCACATGTAATAATACCTAAGGCATTTCTGGAAA  350

seq1  TACTTACCTTGGTCTATTGCCAAGCCCCCCCCCCCCCCAGCCCCAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCTTGGTCTATTGCCAAGCCCCCCCCCCCCCCAGCCCCAAGAAA  400

seq1  TGTTCAATATCCTTAGTCATCAGTGAAATAAAAATGAAACTGACTCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATATCCTTAGTCATCAGTGAAATAAAAATGAAACTGACTCTGAG  450

seq1  ATACCACCTCACACCAGTCAGTATGATTAAGAAAAAAATCTCTGGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACCTCACACCAGTCAGTATGATTAAGAAAAAAATCTCTGGTGACA  500

seq1  GTAGATGCTGGCAAGGATGTGGAGAAAGACAAACACTCTTTCATTGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGCTGGCAAGGATGTGGAGAAAGACAAACACTCTTTCATTGCTAG  550

seq1  TGGGATTGCAAGCTGGTACAACAATTCTGGAAATTAGTCTGGTGATTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGCAAGCTGGTACAACAATTCTGGAAATTAGTCTGGTGATTCCT  600

seq1  CAGAAAATTGGAACTAGTTTTACTTGAAGACTCAGCTATACCCTGCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTGGAACTAGTTTTACTTGAAGACTCAGCTATACCCTGCTTGT  650

seq1  TATCTATTAAGAAAAAGGACATCATTCGTTTTTCAGGCAAATGGATGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTAAGAAAAAGGACATCATTCGTTTTTCAGGCAAATGGATGGAA  700

seq1  TTTGAAACCATCATCCTGAGTGAGGTAACCCAGTCGCAAAATAACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACCATCATCCTGAGTGAGGTAACCCAGTCGCAAAATAACACACA  750

seq1  CGGATATTAGTCATAAAAAGATCAGGATACCTAAGATACAACTCATAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATATTAGTCATAAAAAGATCAGGATACCTAAGATACAACTCATAGAC  800

seq1  CATATGAAATCCAAGAAGAAGGAAGACTACACCAAGGGTGGATACTACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAATCCAAGAAGAAGGAAGACTACACCAAGGGTGGATACTACAA  850

seq1  TATTACTCAGAAGAGGCAAGAAAATAATCCAGGGAAGT  888
      ||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCAGAAGAGGCAAGAAAATAATCCAGGGAAGT  888

seq1: chr19_13169795_13170878
seq2: B6Ng01-272K17.g_72_1157 (reverse)

seq1  ATAATTTTCCACAGTACAGAATGCTACAAAAAA--GAACGTCTGAGCAGC  48
      ||||||||| |||||||||| ||||||||||||   ||||| ||||||||
seq2  ATAATTTTCAACAGTACAGATTGCTACAAAAAAAGAAACGTTTGAGCAGC  50

seq1  ACAGTCATTGTAGGAAATGACCTTTTTTCCTATTAGAAGCTCAGTCATGA  98
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  ACAGTCA-TGTAGGAAATGACC-TTTTTCCTATTAGAAGCTCAGTCATGA  98

seq1  CACTAGGT-GTGACAGCTG-AGGAGTAACAAAAATCAACCAAGGACAGAT  146
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  CACTAGGTGGTGACAGCTGAAGGAGTAACAAAAATCAACCAAGGACAGAT  148

seq1  TACCTAGAAAAATGTACATGGGAGTGTGGAGACAAGAGTCCAGGACAATC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAAAAATGTACATGGGAGTGTGGAGACAAGAGTCCAGGACAATC  198

seq1  AGCAGGATCAGCCCCAGATTTCCCACCAGGGTGATGGTGTAAATGAGGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATCAGCCCCAGATTTCCCACCAGGGTGATGGTGTAAATGAGGAG  248

seq1  AAATATCAAGAAGAGGGGAAGCTGTAATTCTGGGTCATTGGTGAGTCCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAAGAAGAGGGGAAGCTGTAATTCTGGGTCATTGGTGAGTCCCA  298

seq1  GCAGAAGAAACTCTGTCACTTTTGTATTATTCTCCATCAGAGACATCTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGAAACTCTGTCACTTTTGTATTATTCTCCATCAGAGACATCTTT  348

seq1  TAATCACTAGAATATTCACATCTATTGGAAAAGAGAACCATGATGATAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTAGAATATTCACATCTATTGGAAAAGAGAACCATGATGATAAA  398

seq1  GAAGCTGAATCAAAATAGAAATGCATAAGTGTGGAACTATGACTTGGTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGAATCAAAATAGAAATGCATAAGTGTGGAACTATGACTTGGTTG  448

seq1  AACAATAATTGGTACTTTGAAATTACATAGAAAATAAACTTTTCCCAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATTGGTACTTTGAAATTACATAGAAAATAAACTTTTCCCAAAT  498

seq1  TAAATTTGGCATTTTAGTTATATAAAAGGTTAGATATGCCAAACTTTAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGGCATTTTAGTTATATAAAAGGTTAGATATGCCAAACTTTAGT  548

seq1  GATTATTAATTGTTTTCCTATGTTGTTACCCAACTTTAAATTTTTGTAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAATTGTTTTCCTATGTTGTTACCCAACTTTAAATTTTTGTAGT  598

seq1  TCATGTACAGAATTTGAGATTATTTAATAATGAATGTGATTAAAGTGATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTACAGAATTTGAGATTATTTAATAATGAATGTGATTAAAGTGATG  648

seq1  TGTGAATGATTTCCAATTCAGTTCTGAGTATAATAAAAATTTTCTTTCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGATTTCCAATTCAGTTCTGAGTATAATAAAAATTTTCTTTCTA  698

seq1  TGTTGTTTTGTTTCCAAGGTCTTCTCTAGGTGAAGTCCATTCCACATATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTTGTTTCCAAGGTCTTCTCTAGGTGAAGTCCATTCCACATATT  748

seq1  TTCTTAATTATATTAGAATTGTTATTGTTTTCATTTAAGTTATGGAACAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTATATTAGAATTGTTATTGTTTTCATTTAAGTTATGGAACAC  798

seq1  AAAGTTTGGTAATTTATTCATATTTTAAGTGTAAAATGCTAGTCTTTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGGTAATTTATTCATATTTTAAGTGTAAAATGCTAGTCTTTGCT  848

seq1  TTGGGTTCTCGATTTTATTTAACCCATTGTGATTTCCAAGCATGAGACTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCTCGATTTTATTTAACCCATTGTGATTTCCAAGCATGAGACTC  898

seq1  CAAGCAGAATTTTAGATAAATTGAAGATAAGAGAAATTATATGTACATGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGAATTTTAGATAAATTGAAGATAAGAGAAATTATATGTACATGT  948

seq1  GTACTTTGGCACAAACTCAGCATTACTAGAATTCCAGACTTCTCTTTCTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGGCACAAACTCAGCATTACTAGAATTCCAGACTTCTCTTTCTA  998

seq1  TTTCTAAACACATGCTCCTTGTTCAATATTTTGTCCTGGGAAACAAGGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAACACATGCTCCTTGTTCAATATTTTGTCCTGGGAAACAAGGGC  1048

seq1  CTAGAAATGTGTGTCCTCTAAAATAAATACTATGACTA  1084
      ||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATGTGTGTCCTCTAAAATAAATACTATGACTA  1086