BAC Information

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BAC

Clone NameB6Ng01-274K03
Chromosome19 (Build37)
Map Location 52,327,471 - 52,328,544
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936
Downstream geneIns1, LOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K03.bB6Ng01-274K03.g
ACCGA075884GA075885
length1,0971,154
definitionB6Ng01-274K03.b B6Ng01-274K03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcataactctagattttatgaacaataatgttctcaaatttta
caatagcccagagtggtaatctactgtgcaaaactcgctctctctgagac
taattgtctcattggcatcacgaggattcagtagagataatataaataaa
gaatctagagggaaaaagtatcaaaaaccagtctactcaatgttgtgcct
ggtctaaataagacctctgcgctgctgtctccaaaagaagtttgttgttg
ttgttgttgttgttgttgttgttgttgttgttgtcgttaacattctaaac
atttcatgaaacttccacatcaataatatcagcatcactagaattttccc
cagttcccttttataaaggaaataccagccaataatagtagctagaatgg
tcattcctactttcatgaaaacaatagttaaatgaagcaagagttacctg
aagacagcaaaatattagtgaaaatttggagaggaaaggttcttttgtag
catagcaatgcatgttttatcctgaaatctgtgtggtagtggagctacaa
ggtacaaggtaactgctgagagtgtgagtcacaactttggctgcctttga
atttaagtttaccatgtagtcccagaactgcatgccagacatggcagcaa
tgcagtcaatggcagctttgagagaattttgccactgctgtgacttgcag
ctgagtagaaatgatcagaccagtcaaggtttatctgaaactattgactc
ttcagagccatcatagtagaataaatgctgatacaacctttgtcttggac
ccagatagagtgaggtaaattcttcagcctcagatcaaggtgatttgtga
ggctaaagatgttctagagtgataaaatcaaccacctaaaccaacatata
tccaacatgtcctgtcctcactagagccgtgtccagcattacctgaatag
cttctggtcctacttaaccctatgaataaaagaagccacattccctctgg
cccctttggagaactgtttcctctgccttcattgaatttcttctaatact
tgacggaaccaggcaaggaagtctgttcttccgtcaatgggcctccc

gaattcttacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggaccttgagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatgtaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggaaggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
agacccagatgtagctgtctcttgtgagactatgcccggggtctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggagagctagagaaagtagccagagctaaagggatctgcaaccctata
gtgacacatatgactacagtacccgagctctgactctagctgcatattat
atcaaagatgcttagttcggccatcacttgcaaagagagtcatgaactgc
aacttaatgccagtaagtatccagctaatggcaagtgttgtacagtggaa
gttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52327471_52328544
seq2: B6Ng01-274K03.b_49_1145

seq1  GAATTCTTCATAACTCTAGATTTTATGAACAATAATGTTCTCAAATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAACTCTAGATTTTATGAACAATAATGTTCTCAAATTTTA  50

seq1  CAATAGCCCAGAGTGGTAATCTACTGTGCAAAACTCGCTCTCTCTGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCCAGAGTGGTAATCTACTGTGCAAAACTCGCTCTCTCTGAGAC  100

seq1  TAATTGTCTCATTGGCATCACGAGGATTCAGTAGAGATAATATAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTCTCATTGGCATCACGAGGATTCAGTAGAGATAATATAAATAAA  150

seq1  GAATCTAGAGGGAAAAAGTATCAAAAACCAGTCTACTCAATGTTGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTAGAGGGAAAAAGTATCAAAAACCAGTCTACTCAATGTTGTGCCT  200

seq1  GGTCTAAATAAGACCTCTGCGCTGCTGTCTCCAAAAGAAGTTTGTTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAATAAGACCTCTGCGCTGCTGTCTCCAAAAGAAGTTTGTTGTTG  250

seq1  TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTAACATTCTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTAACATTCTAAAC  300

seq1  ATTTCATGAAACTTCCACATCAATAATATCAGCATCACTAGAATTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGAAACTTCCACATCAATAATATCAGCATCACTAGAATTTTCCC  350

seq1  CAGTTCCCTTTTATAAAGGAAATACCAGCCAATAATAGTAGCTAGAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCTTTTATAAAGGAAATACCAGCCAATAATAGTAGCTAGAATGG  400

seq1  TCATTCCTACTTTCATGAAAACAATAGTTAAATGAAGCAAGAGTTACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTACTTTCATGAAAACAATAGTTAAATGAAGCAAGAGTTACCTG  450

seq1  AAGACAGCAAAATATTAGTGAAAATTTGGAGAGGAAAGGTTCTTTTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCAAAATATTAGTGAAAATTTGGAGAGGAAAGGTTCTTTTGTAG  500

seq1  CATAGCAATGCATGTTTTATCCTGAAATCTGTGTGGTAGTGGAGCTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAATGCATGTTTTATCCTGAAATCTGTGTGGTAGTGGAGCTACAA  550

seq1  GGTACAAGGTAACTGCTGAGAGTGTGAGTCACAACTTTGGCTGCCTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAGGTAACTGCTGAGAGTGTGAGTCACAACTTTGGCTGCCTTTGA  600

seq1  ATTTAAGTTTACCATGTAGTCCCAGAACTGCATGCCAGACATGGCAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTTACCATGTAGTCCCAGAACTGCATGCCAGACATGGCAGCAA  650

seq1  TGCAGTCAATGGCAGCTTTGAGAGAATTTTGCCACTGCTGTGACTTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCAATGGCAGCTTTGAGAGAATTTTGCCACTGCTGTGACTTGCAG  700

seq1  CTGAGTAGAAATGATCAGACCAGTCAAGGTTTATCTGAAACTATTGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAGAAATGATCAGACCAGTCAAGGTTTATCTGAAACTATTGACTC  750

seq1  TTCAGAGCCATCATAGTAGAATAAATGCTGATACAACCTTTGTCTTGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGCCATCATAGTAGAATAAATGCTGATACAACCTTTGTCTTGGAC  800

seq1  CCAGATAGAGTGAGGTAAATTCTTCAGCCTCAGATCAAGGTGA-TTGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCAGATAGAGTGAGGTAAATTCTTCAGCCTCAGATCAAGGTGATTTGTGA  850

seq1  GGCT-AAGATGTTCTAGAGTGATAAAATCAACCACCT-AACCAACATATA  897
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCTAAAGATGTTCTAGAGTGATAAAATCAACCACCTAAACCAACATATA  900

seq1  TCCAACATGTCCTGTCCTCACTAGAG-CGTGTCCAGCATTACCTG-ATAG  945
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  TCCAACATGTCCTGTCCTCACTAGAGCCGTGTCCAGCATTACCTGAATAG  950

seq1  C-TCT-GTCCTACT--AGCCCATG-ATAAAAGAAGCCACATACC--CTTG  988
      | ||| ||||||||  | || ||| |||||||||||||||| ||  || |
seq2  CTTCTGGTCCTACTTAACCCTATGAATAAAAGAAGCCACATTCCCTCTGG  1000

seq1  CCCCTT--GAG-ACTGTTT-CTCTGCCTTCA-TGAATTTC-TCTAATACT  1032
      ||||||  ||| ||||||| ||||||||||| |||||||| |||||||||
seq2  CCCCTTTGGAGAACTGTTTCCTCTGCCTTCATTGAATTTCTTCTAATACT  1050

seq1  TGACAGACACA-GCAAG--AGTCTGTTCT--CCTCCATGGGCCTCCC  1074
      |||| ||  || |||||  ||||||||||  | || |||||||||||
seq2  TGACGGAACCAGGCAAGGAAGTCTGTTCTTCCGTCAATGGGCCTCCC  1097


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