BAC Information

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BAC

Clone NameB6Ng01-276D15
Chromosome19 (Build37)
Map Location 36,292,280 - 36,437,911
singlet/doubletdoublet
Overlap geneLOC668195
Upstream geneLOC100042292, A830019P07Rik, Htr7, Rpp30, Ankrd1
Downstream genePcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276D15.bB6Ng01-276D15.g
ACCGA077060GA077061
length1,1171,130
definitionB6Ng01-276D15.b B6Ng01-276D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,436,777 - 36,437,911)(36,292,280 - 36,293,418)
sequence
gaattctaacttcaaagcaaacgcctgtcttatcttttaatatacacatt
tctagatgaatccaggcgaatgattggatctaggtgaatctccagtcccc
tcctgacctctgcattagctttttcttactgattttagttttccgctaca
ctagcccgtggaaattatttagaaatttaaagtgtgctaccacttgctcc
caaaggcaaaccagacataaacattttacccgcttcttctaatattttat
tttctattgcaaaacaacatgtgtagtctaaactttattgatatattaat
tctagacctttattaatatatttttcaggtaccttattatatagtagctt
gttcccctcctgcatatctgtaatagtcaatcttttctgcagccaagtat
gtccagggacagtatgtggtccatgtatcctaatatagctgcacccattg
ttgttaccgtactaccataacagctgatggtagctggtgttttgacctcc
aatccattattccccacgatttagcaaataaagagttaacatctgctcca
gcagggacagattattcaaaacttgcctttactccacagaaggtccctgt
tctgacttgtcagtggcctggctaccagttggttgttaaatattctgaat
atcgcctgtaggtatgaacacgtgattcatcccttgctatctgaatgtga
cgctcttccaaacatgcccttgttcttgcaatccagagcataacacagac
tgaccaggttctaaccctagaggtgagggcaagccttcatggatagtggg
tgacatcattcgcttcaaatgctcaccctgaactggatcacaggaaaaac
agtaactaagttctcctttaagttacaatttagaaagtttctattatatt
acagctgtatagactttatttttttccttttggtttaagacgaggtctta
ctatgtagccttggctgtcctggtactccctatgtggaccaggcttgccc
tgcacccacagatccagttcctctcctttgcctccgagtgctggatacag
tgtgactgcttgccagctactggactttctgtagggctccacatcccact
gaagtttttctactgat
gaattcattttcagagaaatgcaagcagaggaagggctgccttgagccca
ggctgagtcttatgcaaaaacagccagctttacagacagcatcccaacgg
tggtgcattcttcacccaggaatcttgaacagggggcaatcgggagagag
agatctgtgtgagagaaaaatgaacatgagaagggtgggtggtaaaaaag
attcatgaagagcagcaaattcggggctctcgctgggggttctgcttcca
aactgttcaccttcccaaaacagggcaaggaggtggggaaggatgctgct
gagtggatttcttcatctgatgagtgatgctctgtcaatacagggtgttt
agccatctgggcttgcttccttgagaccctacctgccagccccaatgaaa
tctcttctttttttgaattaaaaaaaaaatttgtatgcagtactagattt
ctgacaatatcatgtgtggagtttgccgctcttttaatttttcattttgt
ttcttttggggttggtttcactttcattcatttttcctcattcattaatc
ctccccccccccccacccaggagtatgggccacccgtctccctggagatt
atcactgtgctgagatgctaatagacgcagcccttgttctcctaatcatc
taatagaaaattaaatagaaatcattcatttactaagcaattacagttac
aaactatgatgaggacaatgggatacaagcacataagacttcagatgctg
agctgtgtcctttacaacatccagtggattcatagatctgtccatttgga
aaatagacaaattagcacatagaccatttaaattagcccatgggtttggc
ttaatcagctctttccatccagagtcctgcgatggcgttccaaaagaagc
agaagattattggactcaatggacaataaaggaatagttcagcacactga
gaaccagtggtaatctgcttgagaaattagaacaaaaacaaacttattta
cagcagtgagttgtcagaggcccaccacagagggagcgtgatggacgaga
gcaaggccagagctcaagtcaacagaaacagaccaagatgctctttccaa
cattgcgcattccctcagaagggaactgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_36436777_36437911
seq2: B6Ng01-276D15.b_46_1162 (reverse)

seq1  ATCAGTTAAGAAAAACTGTCAAGTGGGATTGGTGGAGGCCCTACCAGAAA  50
      ||||||  ||||||||| || ||||||||  ||||| |||||| ||||||
seq2  ATCAGT--AGAAAAACT-TC-AGTGGGAT--GTGGA-GCCCTA-CAGAAA  42

seq1  GTCCCAGTAGCTGGGCAAAGCAGTTCACACTGTTAATCCCAGCACTCGGA  100
      || |||||||||||   |||||| |||||||||  || ||||||||||||
seq2  GT-CCAGTAGCTGG--CAAGCAG-TCACACTGT--AT-CCAGCACTCGGA  85

seq1  GGCAAAGGGAGGAGGAACTTGGATCTGTGGGTGCAGGGCAAGCCTGGTCC  150
      ||||||||   ||||||| |||||||||||||||||||||||||||||||
seq2  GGCAAAGG--AGAGGAAC-TGGATCTGTGGGTGCAGGGCAAGCCTGGTCC  132

seq1  ACATAGGGAGTACCAGGACAGCCAAGGCTACATAGTAAGACCTCGTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGAGTACCAGGACAGCCAAGGCTACATAGTAAGACCTCGTCTTA  182

seq1  AACCAAAAGGAAAAAAATAAAGTCTATACAGCTGTAATATAATAGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAGGAAAAAAATAAAGTCTATACAGCTGTAATATAATAGAAACT  232

seq1  TTCTAAATTGTAACTTAAAGGAGAACTTAGTTACTGTTTTTCCTGTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTGTAACTTAAAGGAGAACTTAGTTACTGTTTTTCCTGTGATC  282

seq1  CAGTTCAGGGTGAGCATTTGAAGCGAATGATGTCACCCACTATCCATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGGGTGAGCATTTGAAGCGAATGATGTCACCCACTATCCATGAA  332

seq1  GGCTTGCCCTCACCTCTAGGGTTAGAACCTGGTCAGTCTGTGTTATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCCCTCACCTCTAGGGTTAGAACCTGGTCAGTCTGTGTTATGCTC  382

seq1  TGGATTGCAAGAACAAGGGCATGTTTGGAAGAGCGTCACATTCAGATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGCAAGAACAAGGGCATGTTTGGAAGAGCGTCACATTCAGATAGC  432

seq1  AAGGGATGAATCACGTGTTCATACCTACAGGCGATATTCAGAATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGAATCACGTGTTCATACCTACAGGCGATATTCAGAATATTTAA  482

seq1  CAACCAACTGGTAGCCAGGCCACTGACAAGTCAGAACAGGGACCTTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACTGGTAGCCAGGCCACTGACAAGTCAGAACAGGGACCTTCTGT  532

seq1  GGAGTAAAGGCAAGTTTTGAATAATCTGTCCCTGCTGGAGCAGATGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAAAGGCAAGTTTTGAATAATCTGTCCCTGCTGGAGCAGATGTTAA  582

seq1  CTCTTTATTTGCTAAATCGTGGGGAATAATGGATTGGAGGTCAAAACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTTGCTAAATCGTGGGGAATAATGGATTGGAGGTCAAAACACC  632

seq1  AGCTACCATCAGCTGTTATGGTAGTACGGTAACAACAATGGGTGCAGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCATCAGCTGTTATGGTAGTACGGTAACAACAATGGGTGCAGCTA  682

seq1  TATTAGGATACATGGACCACATACTGTCCCTGGACATACTTGGCTGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGATACATGGACCACATACTGTCCCTGGACATACTTGGCTGCAGA  732

seq1  AAAGATTGACTATTACAGATATGCAGGAGGGGAACAAGCTACTATATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGACTATTACAGATATGCAGGAGGGGAACAAGCTACTATATAAT  782

seq1  AAGGTACCTGAAAAATATATTAATAAAGGTCTAGAATTAATATATCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACCTGAAAAATATATTAATAAAGGTCTAGAATTAATATATCAATA  832

seq1  AAGTTTAGACTACACATGTTGTTTTGCAATAGAAAATAAAATATTAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAGACTACACATGTTGTTTTGCAATAGAAAATAAAATATTAGAAG  882

seq1  AAGCGGGTAAAATGTTTATGTCTGGTTTGCCTTTGGGAGCAAGTGGTAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGGTAAAATGTTTATGTCTGGTTTGCCTTTGGGAGCAAGTGGTAGC  932

seq1  ACACTTTAAATTTCTAAATAATTTCCACGGGCTAGTGTAGCGGAAAACTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAAATTTCTAAATAATTTCCACGGGCTAGTGTAGCGGAAAACTA  982

seq1  AAATCAGTAAGAAAAAGCTAATGCAGAGGTCAGGAGGGGACTGGAGATTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTAAGAAAAAGCTAATGCAGAGGTCAGGAGGGGACTGGAGATTC  1032

seq1  ACCTAGATCCAATCATTCGCCTGGATTCATCTAGAAATGTGTATATTAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGATCCAATCATTCGCCTGGATTCATCTAGAAATGTGTATATTAAA  1082

seq1  AGATAAGACAGGCGTTTGCTTTGAAGTTAGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  AGATAAGACAGGCGTTTGCTTTGAAGTTAGAATTC  1117

seq1: chr19_36292280_36293418
seq2: B6Ng01-276D15.g_66_1195

seq1  GAATTCATTTTCAGAGAAATGCAAGCAGAGGAAGGGCTGCCTTGAGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCAGAGAAATGCAAGCAGAGGAAGGGCTGCCTTGAGCCCA  50

seq1  GGCTGAGTCTTATGCAAAAACAGCCAGCTTTACAGACAGCATCCCAACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGTCTTATGCAAAAACAGCCAGCTTTACAGACAGCATCCCAACGG  100

seq1  TGGTGCATTCTTCACCCAGGAATCTTGAACAGGGGGCAATCGGGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCATTCTTCACCCAGGAATCTTGAACAGGGGGCAATCGGGAGAGAG  150

seq1  AGATCTGTGTGAGAGAAAAATGAACATGAGAAGGGTGGGTGGTAAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTGTGAGAGAAAAATGAACATGAGAAGGGTGGGTGGTAAAAAAG  200

seq1  ATTCATGAAGAGCAGCAAATTCGGGGCTCTCGCTGGGGGTTCTGCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAAGAGCAGCAAATTCGGGGCTCTCGCTGGGGGTTCTGCTTCCA  250

seq1  AACTGTTCACCTTCCCAAAACAGGGCAAGGAGGTGGGGAAGGATGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCACCTTCCCAAAACAGGGCAAGGAGGTGGGGAAGGATGCTGCT  300

seq1  GAGTGGATTTCTTCATCTGATGAGTGATGCTCTGTCAATACAGGGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATTTCTTCATCTGATGAGTGATGCTCTGTCAATACAGGGTGTTT  350

seq1  AGCCATCTGGGCTTGCTTCCTTGAGACCCTACCTGCCAGCCCCAATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTGGGCTTGCTTCCTTGAGACCCTACCTGCCAGCCCCAATGAAA  400

seq1  TCTCTTCTTTTTTTGAATTAAAAAAAAAATTTGTATGCAGTACTAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTTTTTTGAATTAAAAAAAAAATTTGTATGCAGTACTAGATTT  450

seq1  CTGACAATATCATGTGTGGAGTTTGCCGCTCTTTTAATTTTTCATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAATATCATGTGTGGAGTTTGCCGCTCTTTTAATTTTTCATTTTGT  500

seq1  TTCTTTTGGGGTTGGTTTCACTTTCATTCATTTTTCCTCATTCATTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGGGGTTGGTTTCACTTTCATTCATTTTTCCTCATTCATTAATC  550

seq1  CTCCCCCCCCCCCCACCCAGGAGTATGGGCCACCCGTCTCCCTGGAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCCCACCCAGGAGTATGGGCCACCCGTCTCCCTGGAGATT  600

seq1  ATCACTGTGCTGAGATGCTAATAGACGCAGCCCTTGTTCTCCTAATCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTGCTGAGATGCTAATAGACGCAGCCCTTGTTCTCCTAATCATC  650

seq1  TAATAGAAAATTAAATAGAAATCATTCATTTACTAAGCAATTACAGTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAAATTAAATAGAAATCATTCATTTACTAAGCAATTACAGTTAC  700

seq1  AAACTATGATGAGGACAATGGGATACAAGCACATAAGACTTCAGATGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGATGAGGACAATGGGATACAAGCACATAAGACTTCAGATGCTG  750

seq1  AGCTGTGTCCTTTACAACATCCAGTGGATTCATAGATCTGTCCATTTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTCCTTTACAACATCCAGTGGATTCATAGATCTGTCCATTTGGA  800

seq1  AAATAGACAAATTAGCACATAGACCATTTAAATTAGCCCAT-GGTTTGGC  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATAGACAAATTAGCACATAGACCATTTAAATTAGCCCATGGGTTTGGC  850

seq1  TTAATCAGCTCTTTCCATCCAGAGTCCTGCGATGGCGTTCC-AAAGAAGC  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTAATCAGCTCTTTCCATCCAGAGTCCTGCGATGGCGTTCCAAAAGAAGC  900

seq1  AGAAGGATTATTGGACTCAATGGACAATAAAGGAATAGTTCAGCAACACT  948
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAA-GATTATTGGACTCAATGGACAATAAAGGAATAGTTCAGC-ACACT  948

seq1  GAGAACCAGTGGTAAATCTGCTTGAGAAATTTAAAAAAACAAAAACAAAA  998
      ||||||||||||| |||||||||||||||||    | |||||||||  ||
seq2  GAGAACCAGTGGT-AATCTGCTTGAGAAATT----AGAACAAAAAC--AA  991

seq1  AACTATTTACAGCAGTGAGGTGTCAGAAGCC--ACACAGAGGGAGCGTGA  1046
      |  |||||||||||||||| ||||||| |||   ||||||||||||||||
seq2  ACTTATTTACAGCAGTGAGTTGTCAGAGGCCCACCACAGAGGGAGCGTGA  1041

seq1  TGGACGAAGAGCAAAGCCAAGAGCTC-AGTCAACAG-AACAGACCCAAGG  1094
      |||||| ||||||| ||| ||||||| ||||||||| ||||||||  | |
seq2  TGGACG-AGAGCAAGGCC-AGAGCTCAAGTCAACAGAAACAGACC--AAG  1087

seq1  ATGCTCTTTCCAACATTGCGCA-TCCCTCAAGAAGGGGTGACTGTG  1139
      |||||||||||||||||||||| |||||| |||||||   ||||||
seq2  ATGCTCTTTCCAACATTGCGCATTCCCTC-AGAAGGG--AACTGTG  1130