BAC Information

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BAC

Clone NameB6Ng01-279D13
Chromosome19 (Build37)
Map Location 14,229,119 - 14,331,152
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG667433, Tle4, EG433225, EG635497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279D13.bB6Ng01-279D13.g
ACCGA079256GA079257
length1,0541,027
definitionB6Ng01-279D13.b B6Ng01-279D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,330,103 - 14,331,152)(14,229,119 - 14,229,676)
sequence
gaattcaaagcatctgccgattttgaaaaatggcttaagactttcaagca
ccttattgaggtctggagcagaacactgtaaaagcctgaagctttgaagg
gtgatgttattggttagctatagtctgttttgtgaaagacactcctggag
tgattaacatgtctttctccagttaagcagatgactcaaaataaaggaaa
tgaacacaaaatgaaggcagcaaagccagacttttactgcttttagatag
ccttgagcagtcaccattgtcgaaagacttcttagagtaaagtatcactc
cctggctccatgcatttatttgttcctgtttattcatctaccttgagcgt
gacacacaaaacacatagttgacattcgtgtagtttctcttccggtctac
ttggtcccttctagaagatcagcatggctgtctctttccccttttatgtt
ttctcagttctcacagtgaaggttaaaggtgggagaagaagggaggggta
tcttggaggataacttcttctgtaccattttcagctttacacctctcgct
gaggaattctgcagagaattgaggatacacaaaacctgctattgcacatg
gcttcgcagtctgcaggccctctatgctgctgaacctggaaagacccaga
gggcaactccttcctcagtccaggtggtactgttctttccctcagcctga
aattagtgagcaaacagcctacattttcagagcccgtcaaggtcttgact
agaatgctaaacttctgactgagcagtcaatttttaacgacctgggggat
gtagagtgggttatgagagagaaaattgatttagaaagggaaaaagtcca
tttttagatgctaaaggaacgtgttcttatcagtgaggagaagaagggta
aattagactgtgacacggcagccctctttatagaagtcgccacagagtga
ctgcagcacattcagatggaggtctcctgaatgccaggtctgagcatcca
tctcccaagttgggcaaatgtgagctagctccaagattcagacttttcag
gaaa
gaattcaaaagaaaaatgataactttgcccaaacaatgtaaagacatgaa
tgtacaatattccaagagaacaaactcatagaactaaatgaaataaggaa
atcaataaaaggtataaaatagaattacagaaagagaaatgtttttaaaa
actaaactgaaatgatcctggaaatgaaaaacacaataaaccaaataaaa
ttctcaggggaaagccttaccagtgggatggaacatgagaaaaacagaat
atcagggcttaaaaacaaggtagagtaaatagatgatccagtaaatatta
atgatttttttaatatgtgcgttgaacttaggaagtcttggtgacaccat
gaaaagaccatagtttttaattatagtcacaaaagaattcttcaccacag
gcacaaaatattttcaataaaatcatagataacaatttcaaattttatag
aaaaagatgcacatttatataattctgactaccagattggtttagaaaat
aggatctttcttttttctcatccaagaaatacatgttactatccaagaca
tatacagccttaagtcaaaagggctgaaaaaggtatctcaagcttctgga
actgagaagtgagcagccatatttacttttatgtttgagaagatggaatc
caacccaaaacttgtgagagagaaaagaaaggtcacttcatacgcattaa
gagaacaacccatcaagaggaaattaccaaacatatatacagtaaccaaa
ggtgtactcaatttcataaacccaataatactaggtataaagccacagat
tagtcacgacacaatgacagtagaacaattcaatacccattctcaccaat
tgatagatcactgggggaaaaaaaactgaacagagaatcactggagctta
ttaaagacttcataaatcaaatggatcagagagatctagaagatattcca
cccaagtactaaagaatacacattcttctcagtaacccatggtactttca
caaaactgatcacatgtagtcagaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14330103_14331152
seq2: B6Ng01-279D13.b_48_1101 (reverse)

seq1  TTTCCTGAAAAGTCTG-ATTTTGTAGCTA-CTCACATTTTGCCAACCTTG  48
      |||||||||||||||| || ||| ||||| |||||| |||||| | ||||
seq2  TTTCCTGAAAAGTCTGAATCTTGGAGCTAGCTCACA-TTTGCCCAACTTG  49

seq1  GTAGATGGATGCTCAGGCCTGGCA-TCAGTGAAACCTCCATCTGGATGTG  97
      | |||||||||||||| ||||||| |||| || ||||||||||| |||||
seq2  GGAGATGGATGCTCAGACCTGGCATTCAG-GAGACCTCCATCTGAATGTG  98

seq1  CTGCAGTCACTCTTGTGGCAACTTCTATAAAG-TGGCTGCCGTGTCACCG  146
      |||||||||||| |||||| ||||||||||||  |||||||||||||| |
seq2  CTGCAGTCACTC-TGTGGCGACTTCTATAAAGAGGGCTGCCGTGTCACAG  147

seq1  TCTTATTTTCCCTTCTTCTCCTCACTGATAATGACACGTTCC-TTAGCAT  195
      ||| |||| ||||||||||||||||||||||  ||||||||| |||||||
seq2  TCTAATTTACCCTTCTTCTCCTCACTGATAAGAACACGTTCCTTTAGCAT  197

seq1  CT-AAAATGGACTTTTTCCC-TTCTAAATCAATTTTCTCTCTCATAACCC  243
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTAAAAATGGACTTTTTCCCTTTCTAAATCAATTTTCTCTCTCATAACCC  247

seq1  ACTCTACATCCCCCAGGTCGTTAAAAATTGACTGCTCAGTCAGAAGTTTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACATCCCCCAGGTCGTTAAAAATTGACTGCTCAGTCAGAAGTTTA  297

seq1  GCATTCTAGTCAAGACCTTGACGGGCTCTGAAAATGTAGGCTGTTTGCTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTAGTCAAGACCTTGACGGGCTCTGAAAATGTAGGCTGTTTGCTC  347

seq1  ACTAATTTCAGGCTGAGGGAAAGAACAGTACCACCTGGACTGAGGAAGGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTCAGGCTGAGGGAAAGAACAGTACCACCTGGACTGAGGAAGGA  397

seq1  GTTGCCCTCTGGGTCTTTCCAGGTTCAGCAGCATAGAGGGCCTGCAGACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCCTCTGGGTCTTTCCAGGTTCAGCAGCATAGAGGGCCTGCAGACT  447

seq1  GCGAAGCCATGTGCAATAGCAGGTTTTGTGTATCCTCAATTCTCTGCAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGCCATGTGCAATAGCAGGTTTTGTGTATCCTCAATTCTCTGCAGA  497

seq1  ATTCCTCAGCGAGAGGTGTAAAGCTGAAAATGGTACAGAAGAAGTTATCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGCGAGAGGTGTAAAGCTGAAAATGGTACAGAAGAAGTTATCC  547

seq1  TCCAAGATACCCCTCCCTTCTTCTCCCACCTTTAACCTTCACTGTGAGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATACCCCTCCCTTCTTCTCCCACCTTTAACCTTCACTGTGAGAA  597

seq1  CTGAGAAAACATAAAAGGGGAAAGAGACAGCCATGCTGATCTTCTAGAAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAACATAAAAGGGGAAAGAGACAGCCATGCTGATCTTCTAGAAG  647

seq1  GGACCAAGTAGACCGGAAGAGAAACTACACGAATGTCAACTATGTGTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGTAGACCGGAAGAGAAACTACACGAATGTCAACTATGTGTTTT  697

seq1  GTGTGTCACGCTCAAGGTAGATGAATAAACAGGAACAAATAAATGCATGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCACGCTCAAGGTAGATGAATAAACAGGAACAAATAAATGCATGG  747

seq1  AGCCAGGGAGTGATACTTTACTCTAAGAAGTCTTTCGACAATGGTGACTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGAGTGATACTTTACTCTAAGAAGTCTTTCGACAATGGTGACTG  797

seq1  CTCAAGGCTATCTAAAAGCAGTAAAAGTCTGGCTTTGCTGCCTTCATTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTATCTAAAAGCAGTAAAAGTCTGGCTTTGCTGCCTTCATTTT  847

seq1  GTGTTCATTTCCTTTATTTTGAGTCATCTGCTTAACTGGAGAAAGACATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATTTCCTTTATTTTGAGTCATCTGCTTAACTGGAGAAAGACATG  897

seq1  TTAATCACTCCAGGAGTGTCTTTCACAAAACAGACTATAGCTAACCAATA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCACTCCAGGAGTGTCTTTCACAAAACAGACTATAGCTAACCAATA  947

seq1  ACATCACCCTTCAAAGCTTCAGGCTTTTACAGTGTTCTGCTCCAGACCTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCCTTCAAAGCTTCAGGCTTTTACAGTGTTCTGCTCCAGACCTC  997

seq1  AATAAGGTGCTTGAAAGTCTTAAGCCATTTTTCAAAATCGGCAGATGCTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTGCTTGAAAGTCTTAAGCCATTTTTCAAAATCGGCAGATGCTT  1047

seq1  TGAATTC  1050
      |||||||
seq2  TGAATTC  1054

seq1: chr19_14229119_14229676
seq2: B6Ng01-279D13.g_64_621

seq1  GAATTCAAAAGAAAAATGATAACTTTGCCCAAACAATGTAAAGACATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAAAAATGATAACTTTGCCCAAACAATGTAAAGACATGAA  50

seq1  TGTACAATATTCCAAGAGAACAAACTCATAGAACTAAATGAAATAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAATATTCCAAGAGAACAAACTCATAGAACTAAATGAAATAAGGAA  100

seq1  ATCAATAAAAGGTATAAAATAGAATTACAGAAAGAGAAATGTTTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAAAGGTATAAAATAGAATTACAGAAAGAGAAATGTTTTTAAAA  150

seq1  ACTAAACTGAAATGATCCTGGAAATGAAAAACACAATAAACCAAATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTGAAATGATCCTGGAAATGAAAAACACAATAAACCAAATAAAA  200

seq1  TTCTCAGGGGAAAGCCTTACCAGTGGGATGGAACATGAGAAAAACAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGGGAAAGCCTTACCAGTGGGATGGAACATGAGAAAAACAGAAT  250

seq1  ATCAGGGCTTAAAAACAAGGTAGAGTAAATAGATGATCCAGTAAATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCTTAAAAACAAGGTAGAGTAAATAGATGATCCAGTAAATATTA  300

seq1  ATGATTTTTTTAATATGTGCGTTGAACTTAGGAAGTCTTGGTGACACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTTTTAATATGTGCGTTGAACTTAGGAAGTCTTGGTGACACCAT  350

seq1  GAAAAGACCATAGTTTTTAATTATAGTCACAAAAGAATTCTTCACCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACCATAGTTTTTAATTATAGTCACAAAAGAATTCTTCACCACAG  400

seq1  GCACAAAATATTTTCAATAAAATCATAGATAACAATTTCAAATTTTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAATATTTTCAATAAAATCATAGATAACAATTTCAAATTTTATAG  450

seq1  AAAAAGATGCACATTTATATAATTCTGACTACCAGATTGGTTTAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATGCACATTTATATAATTCTGACTACCAGATTGGTTTAGAAAAT  500

seq1  AGGATCTTTCTTTTTTCTCATCCAAGAAATACATGTTACTATCCAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTCTTTTTTCTCATCCAAGAAATACATGTTACTATCCAAGACA  550

seq1  TATACAGC  558
      ||||||||
seq2  TATACAGC  558