BAC Information

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BAC

Clone NameB6Ng01-281A10
Chromosome19 (Build37)
Map Location 15,392,297 - 15,393,304
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667433, Tle4, EG433225, EG635497
Downstream genePomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281A10.bB6Ng01-281A10.g
ACCGA080609GA080610
length1,0141,197
definitionB6Ng01-281A10.b B6Ng01-281A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaagggagtggtgggacagcagtggaggcagatgtctcatct
gaaggagaagccagacagtctcatgagaaggtacaaacagctctaccctc
aggtcacgctcagcaatcataagcctcaaattcaattgcaggttttgttc
agaaaacgagagatgtcctggtgggagaggacagcagaggcattccgctg
gtcaaaggctggtgacctgtgctatcccaatgggagacttagtgtataaa
actgagctgccttggggacctgggaacagagaataattacaagtcacgaa
gctgatttcacccttccataaccgcagagtgagagagagaactatggaag
ccggtcctgaaagtgcaaatactggccagacaatagaagtagcaggagtc
atgactcaggcagtgaagtgtacagggaaaggttctcatccttaatgcca
gggagcagaccacaccaatagacaacaactttagagtttgacggccatag
cagtgagacagatcaatgactggaaccacctatccatagtgaatttgctg
ccattgtgtcagggaactctgaaacttcagtggaccacttgacatcacag
ccacatctgtccatcagggtaattaaaacttaacaggggttgagaggaca
aagataggcccatctgtacagatctctctgcttagacccccatcttgaac
attagctgcccatcagggtacagcctagggagtttctgatagaggcatag
aacatagcatccccagatcacagacagcaaacctgagtgtggccagcaca
gcttccagacacacagagaagggaagttataggaccttacaacagctctc
gcagatagcaagacgcccatctaatgtaggctcagcactcacataagtca
cagaaaaagacaagtgccacccatttcaactaagctgtctcccccgagtt
cctctgccagactctaattttagagaactcctaaacctaccatcccataa
cttagaagaaaaaa
gaattcagctaagttacatgacacaaacccaacatataaaagtagtagca
ttgttgtatgctaatagtgaattatttgaaatagaaatcaagaaaccatt
cacatgtacaaaatttacagaggcgattaaaaatttaggggtaaatttaa
ccaaagacatgaaaactatctgtaatgaaaacaataaaatattaatgaaa
gaaattgaagaggatacacacatacagaagaaacatttttaaaaatgttc
atactatccaagcaaatttacaagttcagtgaaaagcctattaaatttcc
agttttttttaacattaggagtaaattgattaattgattaattgatagat
gtctgtatacatatatatgaatgtacatatatacatacatagcatatata
gatacacatacacacacacacacacacacacacacacacatgaatgacac
cataaaacctggagaagccaaactgatgaagagactagcaagatagagag
gagagacagtcaggagaggaatggacatataactataataacctaaaaca
cctttgcactggtataaaagcagacatagctaaagagagcagagtttagg
attaaaaccaagcattcatagcccactgcaagaaaaagaatggagtcctc
aataaatggtgctgggcaaatagggctagattctagttcttatcatttat
tgaaaaaaaaaagagcatctcaaagagaattagagacttaaaatgaggct
tgattgaaaccatgagccaaaaccagaggagaaatattccaggacattga
atacatgaggcttatgataaattcccaaatgcataggaaacaatgcagat
atggataaaagtaattaaagcaaattgtttgatctttgggcttaaaaaag
gaaataatctagggaaaacctataggggaattacaaggaaccgaagtgaa
aataacctgaaaaatcagcagatactactcatttagttaatcaaaaatta
ttttattttaatacagctacatgctagaaaactgtgatcattgctacagt
tacagtccccacaatgtgttttgtagtaggaacagagataggagttccag
gcaatttctgtcagttaggatctgaggggactgcaagaagatggaagcct
aacgaacctgttacaaggcttttcccttaaggggaagatattagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15392297_15393304
seq2: B6Ng01-281A10.b_48_1061

seq1  GAATTCACCAAGGGAGTGGTGGGACAGCAGTGGAGGCAGATGTCTCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAGGGAGTGGTGGGACAGCAGTGGAGGCAGATGTCTCATCT  50

seq1  GAAGGAGAAGCCAGACAGTCTCATGAGAAGGTACAAACAGCTCTACCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAAGCCAGACAGTCTCATGAGAAGGTACAAACAGCTCTACCCTC  100

seq1  AGGTCACGCTCAGCAATCATAAGCCTCAAATTCAATTGCAGGTTTTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACGCTCAGCAATCATAAGCCTCAAATTCAATTGCAGGTTTTGTTC  150

seq1  AGAAAACGAGAGATGTCCTGGTGGGAGAGGACAGCAGAGGCATTCCGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACGAGAGATGTCCTGGTGGGAGAGGACAGCAGAGGCATTCCGCTG  200

seq1  GTCAAAGGCTGGTGACCTGTGCTATCCCAATGGGAGACTTAGTGTATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGCTGGTGACCTGTGCTATCCCAATGGGAGACTTAGTGTATAAA  250

seq1  ACTGAGCTGCCTTGGGGACCTGGGAACAGAGAATAATTACAAGTCACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTGCCTTGGGGACCTGGGAACAGAGAATAATTACAAGTCACGAA  300

seq1  GCTGATTTCACCCTTCCATAACCGCAGAGTGAGAGAGAGAACTATGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTTCACCCTTCCATAACCGCAGAGTGAGAGAGAGAACTATGGAAG  350

seq1  CCGGTCCTGAAAGTGCAAATACTGGCCAGACAATAGAAGTAGCAGGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTCCTGAAAGTGCAAATACTGGCCAGACAATAGAAGTAGCAGGAGTC  400

seq1  ATGACTCAGGCAGTGAAGTGTACAGGGAAAGGTTCTCATCCTTAATGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAGGCAGTGAAGTGTACAGGGAAAGGTTCTCATCCTTAATGCCA  450

seq1  GGGAGCAGACCACACCAATAGACAACAACTTTAGAGTTTGACGGCCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGACCACACCAATAGACAACAACTTTAGAGTTTGACGGCCATAG  500

seq1  CAGTGAGACAGATCAATGACTGGAACCACCTATCCATAGTGAATTTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGACAGATCAATGACTGGAACCACCTATCCATAGTGAATTTGCTG  550

seq1  CCATTGTGTCAGGGAACTCTGAAACTTCAGTGGACCACTTGACATCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTGTCAGGGAACTCTGAAACTTCAGTGGACCACTTGACATCACAG  600

seq1  CCACATCTGTCCATCAGGGTAATTAAAACTTAACAGGGGTTGAGAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTGTCCATCAGGGTAATTAAAACTTAACAGGGGTTGAGAGGACA  650

seq1  AAGATAGGCCCATCTGTACAGATCTCTCTGCTTAGACCCCCATCTTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGGCCCATCTGTACAGATCTCTCTGCTTAGACCCCCATCTTGAAC  700

seq1  ATTAGCTGCCCATCAGGGTACAGCCTAGGGAGTTTCTGATAGAGGCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGCCCATCAGGGTACAGCCTAGGGAGTTTCTGATAGAGGCATAG  750

seq1  AACATAGCATCCCCAGATCACAGACAGCAAACCTGAGTGTGGCCAGCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCATCCCCAGATCACAGACAGCAAACCTGAGTGTGGCCAGCACA  800

seq1  GCTTCCAGACACACAGAGAAGGGAAGTTATAGGACCTTACAACAGCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGACACACAGAGAAGGGAAGTTATAGGACCTTACAACAGCTCTC  850

seq1  GCAGATAGCAAGACGCCCATCTAATGTAGGCTCAGCACTCACATAAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGCAAGACGCCCATCTAATGTAGGCTCAGCACTCACATAAGTCA  900

seq1  CAGAAAAAGACAAGTGCCACCCA-TTCAACTAAGCTGTCTCCCCCGAGTT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGAAAAAGACAAGTGCCACCCATTTCAACTAAGCTGTCTCCCCCGAGTT  950

seq1  CCTCTGCCAGACTCTAA-TTTAGAGAACTCCTAAA-CTACCAATCCCATA  997
      ||||||||||||||||| ||||||||||||||||| ||||| ||||||||
seq2  CCTCTGCCAGACTCTAATTTTAGAGAACTCCTAAACCTACC-ATCCCATA  999

seq1  ACTTA----AAAAAA  1008
      |||||    ||||||
seq2  ACTTAGAAGAAAAAA  1014