BAC Information

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BAC

Clone NameB6Ng01-286K02
Chromosome19 (Build37)
Map Location 51,391,514 - 51,526,862
singlet/doubletdoublet
Overlap genenone
Upstream geneSorcs1
Downstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286K02.bB6Ng01-286K02.g
ACCGA084777GA084778
length1,1081,082
definitionB6Ng01-286K02.b B6Ng01-286K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,391,514 - 51,392,620)(51,525,775 - 51,526,862)
sequence
gaattcaactcaggacctctggaaggaccatcagttttctgaacctctga
accatctctttagcccctgttttgtcacatttcaccaccagacaacacta
tgcctgtgcaaatgttggaatgaaagtgctttatacatgtggacttgtct
atcacacacatacacacacacacacacacacacacacacacacacacaca
cacacacaaatagataaataaatacaatatttataattagttcaaatgtc
tcaaaccttgcaatacatggaaatatttgttaaatttaatattactgata
ttttgtgttgttaacaaaaggctatttggaagagtttctattttgtctca
tagaaaacttctctttgaaaaactctattgcactattatcttcctgaaag
atactcttatccattgaagcaaaattttgtgtagaatttttttctaagca
ttaactaatataaagaaatttcaggaatttaattttgatcatctttaagt
ctttgctgcatagataactgactggaagacaataaattactgacttttaa
ctttcccatgtgtgtcacttgacttgaatgcaaagcaccccaacagaaga
gctaattagtgttttaaactcagtctccatcctgtttaatccagaaaaca
tacctctgaggttcctttagtccttccttagataaatggctattaaaccc
attcaatgttcttgactagcttgtctagattaaaattaggatactctggg
gacttccccaagtttgattgattttttttccctttaataacaaaaataca
aaatcctttgatatactatgccaaattcttttcttattccttatcatcct
tgtctggtgcttaccagcatcacatactgttggatgttaacaaatgttgc
aaatgagatagttagctatttccatgtctgtaagttgataacaaatctaa
atgaagctatttaataagtttgctgagactaaagtttgacctctctccct
ttaccttgtttccacctctgatttctctgtgaaatttacccttggaaaaa
tcctcctcaacctgaagtctgattatcaatttccagaaattatactgatg
ttcaagag

gaattccagaattttccataaatgaaggaaacattctgagacattggcta
catttatactgttaaagaattatatgcatgacatcctgtgattagtttca
taaactcatgtttgaaagacactggatggtacatcccatttacaggttta
aactgctaagtcctggacagatcacaattttcaggtgttcaagtctgcag
agctgggacctaacacatttgtatttagaggagtgcgtacatttagatgc
cagaggtcaaactggaacaatgctctaataaagacatccacctaccaata
caggctgtttcactgggtcccagagctcctagatactgctaggctggctg
tgtggctactgttcatgagctgttcagttgtctctgccatcccagggctc
aggtaaatattcactgggcagaatttaaagaccatgacagaactgtcatt
tacgtcctaagaaaaacggaaaacatgaaaaggattgacatggaagaaaa
ctttgcccactatggtcaggtttgggaacttgttctgtaggaaaacattg
gaagatatgagtgtggaaggtcaggtaataacatggaccagataatctaa
atgcaggctttggcaattgtggcagcagagtgaaaagactcgaatgtttg
atgatgagccaaggcagtgacgtgagagatgatgctagttttgccgtgtt
ccagtcacaatgcataagtgtatccctgagagtgcagtcagatcacgcat
tgtttccaaattcattatgggcccctactgaaagtgatcatatagactca
taaaactcattctaattagttgctttattcttccctaataaaatttaaaa
ccttcattctttcttccaagtggaacttgtaataacttttaaaaattcct
ctctttaaaaagccattttatatgtttgaagtaaaataattactgaatag
tgaagaatgtagttctaattccacaattacgtattaaaaattacttgctg
aagaatgtctagaagacaaattactttatttagtgcacctctgattcctt
ggggcttttaaaataagattggactgaaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51391514_51392620
seq2: B6Ng01-286K02.b_49_1156

seq1  GAATTCAACTCAGGACCTCTGGAAGGACCATCAGTTTTCTGAACCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAGGACCTCTGGAAGGACCATCAGTTTTCTGAACCTCTGA  50

seq1  ACCATCTCTTTAGCCCCTGTTTTGTCACATTTCACCACCAGACAACACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTTTAGCCCCTGTTTTGTCACATTTCACCACCAGACAACACTA  100

seq1  TGCCTGTGCAAATGTTGGAATGAAAGTGCTTTATACATGTGGACTTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGCAAATGTTGGAATGAAAGTGCTTTATACATGTGGACTTGTCT  150

seq1  ATCACACACATACACACACACACACACACACACACACACACACACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACACATACACACACACACACACACACACACACACACACACACACA  200

seq1  CACACACAAATAGATAAATAAATACAATATTTATAATTAGTTCAAATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAAATAGATAAATAAATACAATATTTATAATTAGTTCAAATGTC  250

seq1  TCAAACCTTGCAATACATGGAAATATTTGTTAAATTTAATATTACTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTTGCAATACATGGAAATATTTGTTAAATTTAATATTACTGATA  300

seq1  TTTTGTGTTGTTAACAAAAGGCTATTTGGAAGAGTTTCTATTTTGTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTTGTTAACAAAAGGCTATTTGGAAGAGTTTCTATTTTGTCTCA  350

seq1  TAGAAAACTTCTCTTTGAAAAACTCTATTGCACTATTATCTTCCTGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTTCTCTTTGAAAAACTCTATTGCACTATTATCTTCCTGAAAG  400

seq1  ATACTCTTATCCATTGAAGCAAAATTTTGTGTAGAATTTTTTTCTAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTATCCATTGAAGCAAAATTTTGTGTAGAATTTTTTTCTAAGCA  450

seq1  TTAACTAATATAAAGAAATTTCAGGAATTTAATTTTGATCATCTTTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTAATATAAAGAAATTTCAGGAATTTAATTTTGATCATCTTTAAGT  500

seq1  CTTTGCTGCATAGATAACTGACTGGAAGACAATAAATTACTGACTTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGCATAGATAACTGACTGGAAGACAATAAATTACTGACTTTTAA  550

seq1  CTTTCCCATGTGTGTCACTTGACTTGAATGCAAAGCACCCCAACAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCATGTGTGTCACTTGACTTGAATGCAAAGCACCCCAACAGAAGA  600

seq1  GCTAATTAGTGTTTTAAACTCAGTCTCCATCCTGTTTAATCCAGAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAGTGTTTTAAACTCAGTCTCCATCCTGTTTAATCCAGAAAACA  650

seq1  TACCTCTGAGGTTCCTTTAGTCCTTCCTTAGATAAATGGCTATTAAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGAGGTTCCTTTAGTCCTTCCTTAGATAAATGGCTATTAAACCC  700

seq1  ATTCAATGTTCTTGACTAGCTTGTCTAGATTAAAATTAGGATACTCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTTCTTGACTAGCTTGTCTAGATTAAAATTAGGATACTCTGGG  750

seq1  GACTTCCCCAAGTTTGATTGATTTTTTTTCCCTTTAATAACAAAAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCCAAGTTTGATTGATTTTTTTTCCCTTTAATAACAAAAATACA  800

seq1  AAATCCTTTGATATACTATGCCAAATTCTTTTCTTATTCCTTATCATCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTTGATATACTATGCCAAATTCTTTTCTTATTCCTTATCATCCT  850

seq1  TGTCTGGTGCTTACCAGCATCACATACTGTTGGATGTTAACAAATGTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTGCTTACCAGCATCACATACTGTTGGATGTTAACAAATGTTGC  900

seq1  AAATGAGATAGTTAGCTATTTCCATGTCTGTAAGTTGATAACAAATCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGATAGTTAGCTATTTCCATGTCTGTAAGTTGATAACAAATCTAA  950

seq1  ATGAAGCTATTTAATAAGTTTGCTGAGACTAAAGTTTGACCTCTCTCCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTATTTAATAAGTTTGCTGAGACTAAAGTTTGACCTCTCTCCCT  1000

seq1  TTACCTTGTTTCCACCTCTGATTTCTCTGTGAAATTTACCCTTGGAAAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTGTTTCCACCTCTGATTTCTCTGTGAAATTTACCCTTGGAAAAA  1050

seq1  T-CTCCTCAACCTGAAGTCTGATTATCAATTTCCAGAAATTATACTGATT  1099
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCTCCTCAACCTGAAGTCTGATTATCAATTTCCAGAAATTATACTGATG  1100

seq1  GTCAAGAG  1107
       |||||||
seq2  TTCAAGAG  1108


seq1: chr19_51525775_51526862
seq2: B6Ng01-286K02.g_68_1149 (reverse)

seq1  ACTTTCTCAGTCCAAATCCTTATTTTAAAAAGCCCCAGGGAAATCAGA-G  49
      ||||| |||||||||   |||||||| |||||||||| || ||||||| |
seq2  ACTTT-TCAGTCCAA--TCTTATTTT-AAAAGCCCCAAGG-AATCAGAGG  45

seq1  TGCACTTAAATAAAGTAATTTGTCTTCTAGACATTCTTCAGCAAGTAATT  99
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAC-TAAATAAAGTAATTTGTCTTCTAGACATTCTTCAGCAAGTAATT  94

seq1  TTTAATAACGTAATTGTGGAATTAGAACTACATTCTTCACTATTCAGTAA  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAT-ACGTAATTGTGGAATTAGAACTACATTCTTCACTATTCAGTAA  143

seq1  TTATTTTACTTCAAACATATAAAATGGCTTTTTAAAGAGAGGAATTTTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTACTTCAAACATATAAAATGGCTTTTTAAAGAGAGGAATTTTTA  193

seq1  AAAGTTATTACAAGTTCCACTTGGAAGAAAGAATGAAGGTTTTAAATTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATTACAAGTTCCACTTGGAAGAAAGAATGAAGGTTTTAAATTTT  243

seq1  ATTAGGGAAGAATAAAGCAACTAATTAGAATGAGTTTTATGAGTCTATAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGAAGAATAAAGCAACTAATTAGAATGAGTTTTATGAGTCTATAT  293

seq1  GATCACTTTCAGTAGGGGCCCATAATGAATTTGGAAACAATGCGTGATCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTTCAGTAGGGGCCCATAATGAATTTGGAAACAATGCGTGATCT  343

seq1  GACTGCACTCTCAGGGATACACTTATGCATTGTGACTGGAACACGGCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCACTCTCAGGGATACACTTATGCATTGTGACTGGAACACGGCAAA  393

seq1  ACTAGCATCATCTCTCACGTCACTGCCTTGGCTCATCATCAAACATTCGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATCATCTCTCACGTCACTGCCTTGGCTCATCATCAAACATTCGA  443

seq1  GTCTTTTCACTCTGCTGCCACAATTGCCAAAGCCTGCATTTAGATTATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCACTCTGCTGCCACAATTGCCAAAGCCTGCATTTAGATTATCT  493

seq1  GGTCCATGTTATTACCTGACCTTCCACACTCATATCTTCCAATGTTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATGTTATTACCTGACCTTCCACACTCATATCTTCCAATGTTTTCC  543

seq1  TACAGAACAAGTTCCCAAACCTGACCATAGTGGGCAAAGTTTTCTTCCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACAAGTTCCCAAACCTGACCATAGTGGGCAAAGTTTTCTTCCAT  593

seq1  GTCAATCCTTTTCATGTTTTCCGTTTTTCTTAGGACGTAAATGACAGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCCTTTTCATGTTTTCCGTTTTTCTTAGGACGTAAATGACAGTTC  643

seq1  TGTCATGGTCTTTAAATTCTGCCCAGTGAATATTTACCTGAGCCCTGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGTCTTTAAATTCTGCCCAGTGAATATTTACCTGAGCCCTGGGA  693

seq1  TGGCAGAGACAACTGAACAGCTCATGAACAGTAGCCACACAGCCAGCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAGACAACTGAACAGCTCATGAACAGTAGCCACACAGCCAGCCTA  743

seq1  GCAGTATCTAGGAGCTCTGGGACCCAGTGAAACAGCCTGTATTGGTAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATCTAGGAGCTCTGGGACCCAGTGAAACAGCCTGTATTGGTAGGT  793

seq1  GGATGTCTTTATTAGAGCATTGTTCCAGTTTGACCTCTGGCATCTAAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTTTATTAGAGCATTGTTCCAGTTTGACCTCTGGCATCTAAATG  843

seq1  TACGCACTCCTCTAAATACAAATGTGTTAGGTCCCAGCTCTGCAGACTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCACTCCTCTAAATACAAATGTGTTAGGTCCCAGCTCTGCAGACTTG  893

seq1  AACACCTGAAAATTGTGATCTGTCCAGGACTTAGCAGTTTAAACCTGTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGAAAATTGTGATCTGTCCAGGACTTAGCAGTTTAAACCTGTAA  943

seq1  ATGGGATGTACCATCCAGTGTCTTTCAAACATGAGTTTATGAAACTAATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGTACCATCCAGTGTCTTTCAAACATGAGTTTATGAAACTAATC  993

seq1  ACAGGATGTCATGCATATAATTCTTTAACAGTATAAATGTAGCCAATGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGTCATGCATATAATTCTTTAACAGTATAAATGTAGCCAATGTC  1043

seq1  TCAGAATGTTTCCTTCATTTATGGAAAATTCTGGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGTTTCCTTCATTTATGGAAAATTCTGGAATTC  1082


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