BAC Information

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BAC

Clone NameB6Ng01-290B07
Chromosome19 (Build37)
Map Location 12,806,451 - 12,909,131
singlet/doubletdoublet
Overlap geneZfp91, Cntf, Lpxn
Upstream geneGif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1
Downstream geneEG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290B07.bB6Ng01-290B07.g
ACCGA087310GA087311
length1,1611,156
definitionB6Ng01-290B07.b B6Ng01-290B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,806,451 - 12,807,616)(12,907,988 - 12,909,131)
sequence
gaattctcatctctcagccaagtcctgctgaattcttggaatatcctgac
tgagaacgatgtctttatttacctgagaagttgatccacacctgtgggga
actcttgattccgccttctaggaatttggaaggaatttgacattgggcta
ggacaaggaagtaggctcaaggtgaataaggttgaggaatgtgttctttc
tatcttgatgggtcttgttaagaccctaaatacagtaatcaagggatctt
tgtttatgctttctgtgttctttaactacttggtttatgccttaggactg
attatcttctttgtatgtacctagaatgatataaaagcagacaaaaaaca
aaagcctcttcagcttcagaactggctggggtcctgttatagtgttgtct
aattgtctttttcttttgaatcctccctccctccctccctgtcgaatcta
ttgacttactgagttatcttggtcacacatcagataatttatgctaacaa
tgtgatttacaatggttgaaccctgttttctatcgcagaagaccctgagc
tatcctagattactttgacctgtagggtggagctgaaattggtgactgga
gattagtcacctaaatctctatgaatgactccagtaaaaagtctagatgc
ctagtttcaggtaagattctctgcccaactacattgcccgtgtgttgtca
cacagtcacagtaggagaatgaagcacggactgtgtgttctcccagggag
aacagagctggcttcttacctgcattttgctgattttaatagtctgtgtc
cttacactgtagtcacgatgattaagccagcagcgctgagctctgtggat
cctcaaaggtaactgtcaaacttaaaattgttgctgggaattcctgacat
aatattccttttaattctgttcagctctacacctatttttgaatgtgggc
tttgggagttgtgcccattcactagatgagcgtgcaaaatacagctttgg
ggtggtggttcttcagttgaatggtctattcactaggtatttctgttcta
attctcataagtttaatgtgcttgctagctcacaataacaccactgaact
accttattattgatattaattactatttgcctaactacaatacctgtcac
aattaaaattt
gaattcttttccaagaatcacttcatccattctaattctctaagaagtac
tattttcatgccaatctaaaaataatgcatcagtcctattttaaaggatc
accttccagtgaaggggtttttgcctttaaactcggaatctaggattgta
aaagtctcttttttgctatataaaaataaacatgtgattatttttaagat
tgtagaaagaaaataaagtatgtccatgcctgcccaatgagtgccttact
tatgctctatgtacagcctacttcataaacaaaccaataggatataagac
agtcaaagtcttcagtaacgtgtaaagttttctataaattaatgtatttt
gaaagaacaagtgtttgtgacttggcttccctgtccaaactaaatgacca
tcacttcatcttttctaacatctttcctcaaagaagctgtgcacagattt
tggtcatttctctccatgaggcagttttgagtttgaaggagacacatcct
tcattctttacttttaaaatgcatttgtaaggtatttaatgtacagccag
acctttttccataaagaaaatgatgaaaacaaattctaaaagccttgcta
gcttctaatgatccaaagatttacctctgaaaaataaaatggctaaagac
tcagactaacaggaagagttataagcaatgggtcttgtctgttagtgtct
gctgattgggggagggcagtatctgctatatgcaaggaaagaagagacag
attacactgcagctgcaagtagtggctgatcttctctaacgtgggagcag
aacatttatctaccacatgaacatgacagtgagtcaccaaaaccacaagc
tgctttattcatcacatgtgtcagtaaaaatacactttccgcttaaaaag
caaaatgcagagacactaagggtttaagactatttgcgtgacccctgaca
gcaaagagagagtaaaaccctgtggcccacatctgaagatttgatggagc
atcagcagaggtcaaagggtgagaaagaagaaaaactcagccagtggaaa
gaactggttgcacataagaaaataatacttcagaggctcttgatagcatg
aattctaattctaaatattatcatgaaaaggtatgagaagcatctttcaa
actgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12806451_12807616
seq2: B6Ng01-290B07.b_45_1205

seq1  GAATTCTCATCTCTCAGCCAAGTCCTGCTGAATTCTTGGAATATCCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTCTCAGCCAAGTCCTGCTGAATTCTTGGAATATCCTGAC  50

seq1  TGAGAACGATGTCTTTATTTACCTGAGAAGTTGATCCACACCTGTGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACGATGTCTTTATTTACCTGAGAAGTTGATCCACACCTGTGGGGA  100

seq1  ACTCTTGATTCCGCCTTCTAGGAATTTGGAAGGAATTTGACATTGGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGATTCCGCCTTCTAGGAATTTGGAAGGAATTTGACATTGGGCTA  150

seq1  GGACAAGGAAGTAGGCTCAAGGTGAATAAGGTTGAGGAATGTGTTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGGAAGTAGGCTCAAGGTGAATAAGGTTGAGGAATGTGTTCTTTC  200

seq1  TATCTTGATGGGTCTTGTTAAGACCCTAAATACAGTAATCAAGGGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGATGGGTCTTGTTAAGACCCTAAATACAGTAATCAAGGGATCTT  250

seq1  TGTTTATGCTTTCTGTGTTCTTTAACTACTTGGTTTATGCCTTAGGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGCTTTCTGTGTTCTTTAACTACTTGGTTTATGCCTTAGGACTG  300

seq1  ATTATCTTCTTTGTATGTACCTAGAATGATATAAAAGCAGACAAAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTCTTTGTATGTACCTAGAATGATATAAAAGCAGACAAAAAACA  350

seq1  AAAGCCTCTTCAGCTTCAGAACTGGCTGGGGTCCTGTTATAGTGTTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTCTTCAGCTTCAGAACTGGCTGGGGTCCTGTTATAGTGTTGTCT  400

seq1  AATTGTCTTTTTCTTTTGAATCCTCCCTCCCTCCCTCCCTGTCGAATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTTTTCTTTTGAATCCTCCCTCCCTCCCTCCCTGTCGAATCTA  450

seq1  TTGACTTACTGAGTTATCTTGGTCACACATCAGATAATTTATGCTAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTACTGAGTTATCTTGGTCACACATCAGATAATTTATGCTAACAA  500

seq1  TGTGATTTACAATGGTTGAACCCTGTTTTCTATCGCAGAAGACCCTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTACAATGGTTGAACCCTGTTTTCTATCGCAGAAGACCCTGAGC  550

seq1  TATCCTAGATTACTTTGACCTGTAGGGTGGAGCTGAAATTGGTGACTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGATTACTTTGACCTGTAGGGTGGAGCTGAAATTGGTGACTGGA  600

seq1  GATTAGTCACCTAAATCTCTATGAATGACTCCAGTAAAAAGTCTAGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTCACCTAAATCTCTATGAATGACTCCAGTAAAAAGTCTAGATGC  650

seq1  CTAGTTTCAGGTAAGATTCTCTGCCCAACTACATTGCCCGTGTGTTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCAGGTAAGATTCTCTGCCCAACTACATTGCCCGTGTGTTGTCA  700

seq1  CACAGTCACAGTAGGAGAATGAAGCACGGACTGTGTGTTCTCCCAGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCACAGTAGGAGAATGAAGCACGGACTGTGTGTTCTCCCAGGGAG  750

seq1  AACAGAGCTGGCTTCTTACCTGCATTTTGCTGATTTTAATAGTCTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTGGCTTCTTACCTGCATTTTGCTGATTTTAATAGTCTGTGTC  800

seq1  CTTACACTGTAGTCACGATGATTAAGCCAGCAGCGCTGAGCTCTGTGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACTGTAGTCACGATGATTAAGCCAGCAGCGCTGAGCTCTGTGGAT  850

seq1  CCTCAAAGGTAACTGTCAAACTTAAAATTGTTGCTGGGAATTCCTGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGGTAACTGTCAAACTTAAAATTGTTGCTGGGAATTCCTGACAT  900

seq1  AATATTCCTTTTAATTCTGTTCAGCTCTACACCTATTTTTGAATGTGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTTTTAATTCTGTTCAGCTCTACACCTATTTTTGAATGTGGGC  950

seq1  TTT-GGAGTTGTGCCCATTCACTAGATGAGCGTGCAAAATACAGCTTT-G  998
      ||| |||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTGGGAGTTGTGCCCATTCACTAGATGAGCGTGCAAAATACAGCTTTGG  1000

seq1  GGTGGTGGTTCTTCAGTTGAATGGTCTATTCACTAGGTATTCTTGTTCTT  1048
      |||||||||||||||||||||||||||||||||||||||||  |||||| 
seq2  GGTGGTGGTTCTTCAGTTGAATGGTCTATTCACTAGGTATTTCTGTTCTA  1050

seq1  ATTCTCAT-AGTTTAATGTGCTTGCTAGCTCAC-ATACAACCACTTAAAC  1096
      |||||||| |||||||||||||||||||||||| |||  ||||| | |||
seq2  ATTCTCATAAGTTTAATGTGCTTGCTAGCTCACAATAACACCAC-TGAAC  1099

seq1  TTACTTATTTGTTTGTTTATTTATTTACTTATTTTGCCCTAACTACAATT  1146
      |  ||||||   ||| |   ||| |||| |||||   |||||||||||| 
seq2  TACCTTATT--ATTGAT--ATTAATTAC-TATTT--GCCTAACTACAATA  1142

seq1  ACTGTCACAAATAAATATTT  1166
       ||||||||| |||| ||||
seq2  CCTGTCACAATTAAA-ATTT  1161

seq1: chr19_12907988_12909131
seq2: B6Ng01-290B07.g_68_1223 (reverse)

seq1  TTCATTTTG-AAGATGCTTCTCATTACTTTTTAATTAT-ATATTTAGATT  48
      |||| |||| ||||||||||||| ||| |||| || || ||||||||| |
seq2  TTCAGTTTGAAAGATGCTTCTCA-TACCTTTTCATGATAATATTTAGAAT  49

seq1  TAGA--TCATGCTATCAAGAGCCTCTGAAGGTATA-TTTCTTATGTGCA-  94
      ||||  ||||||||||||||||||||||||   || ||||||||||||| 
seq2  TAGAATTCATGCTATCAAGAGCCTCTGAAGTATTATTTTCTTATGTGCAA  99

seq1  -CAGTTCTTTCCACT-GCTG-GTTTT--CTCTTTCTCA-CCTTTGACCTC  138
       |||||||||||||| |||| |||||   ||||||||| |||||||||||
seq2  CCAGTTCTTTCCACTGGCTGAGTTTTTCTTCTTTCTCACCCTTTGACCTC  149

seq1  TGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCACAGGGTTTTACTCT  188
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCTGATGCTCCA-TCAAATCTTCAGATGTGGGCCACAGGGTTTTACTCT  198

seq1  CTCTTTGCTGTCAGGGGTCACGC-AATAGTCTTAAACCCTTAGTGTCTCT  237
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCTTTGCTGTCAGGGGTCACGCAAATAGTCTTAAACCCTTAGTGTCTCT  248

seq1  GCATTTTGCTTTTTAAGCGG-AAGTGTATTTTTACTGACACATGTGATGA  286
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCATTTTGCTTTTTAAGCGGAAAGTGTATTTTTACTGACACATGTGATGA  298

seq1  ATAAAGCAGCTTGTGGTTTTGGTGACTCACTGTCATGTTCATGTGGTAGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCAGCTTGTGGTTTTGGTGACTCACTGTCATGTTCATGTGGTAGA  348

seq1  TAAATGTTCTGCTCCCACGTTAGAGAAGATCAGCCACTACTTGCAGCTGC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTCTGCTCCCACGTTAGAGAAGATCAGCCACTACTTGCAGCTGC  398

seq1  AGTGTAATCTGTCTCTTCTTTCCTTGCATATAGCAGATACTGCCCTCCCC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAATCTGTCTCTTCTTTCCTTGCATATAGCAGATACTGCCCTCCCC  448

seq1  CAATCAGCAGACACTAACAGACAAGACCCATTGCTTATAACTCTTCCTGT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGCAGACACTAACAGACAAGACCCATTGCTTATAACTCTTCCTGT  498

seq1  TAGTCTGAGTCTTTAGCCATTTTATTTTTCAGAGGTAAATCTTTGGATCA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGAGTCTTTAGCCATTTTATTTTTCAGAGGTAAATCTTTGGATCA  548

seq1  TTAGAAGCTAGCAAGGCTTTTAGAATTTGTTTTCATCATTTTCTTTATGG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGCTAGCAAGGCTTTTAGAATTTGTTTTCATCATTTTCTTTATGG  598

seq1  AAAAAGGTCTGGCTGTACATTAAATACCTTACAAATGCATTTTAAAAGTA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGTCTGGCTGTACATTAAATACCTTACAAATGCATTTTAAAAGTA  648

seq1  AAGAATGAAGGATGTGTCTCCTTCAAACTCAAAACTGCCTCATGGAGAGA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAGGATGTGTCTCCTTCAAACTCAAAACTGCCTCATGGAGAGA  698

seq1  AATGACCAAAATCTGTGCACAGCTTCTTTGAGGAAAGATGTTAGAAAAGA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAAAATCTGTGCACAGCTTCTTTGAGGAAAGATGTTAGAAAAGA  748

seq1  TGAAGTGATGGTCATTTAGTTTGGACAGGGAAGCCAAGTCACAAACACTT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGATGGTCATTTAGTTTGGACAGGGAAGCCAAGTCACAAACACTT  798

seq1  GTTCTTTCAAAATACATTAATTTATAGAAAACTTTACACGTTACTGAAGA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCAAAATACATTAATTTATAGAAAACTTTACACGTTACTGAAGA  848

seq1  CTTTGACTGTCTTATATCCTATTGGTTTGTTTATGAAGTAGGCTGTACAT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTGTCTTATATCCTATTGGTTTGTTTATGAAGTAGGCTGTACAT  898

seq1  AGAGCATAAGTAAGGCACTCATTGGGCAGGCATGGACATACTTTATTTTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATAAGTAAGGCACTCATTGGGCAGGCATGGACATACTTTATTTTC  948

seq1  TTTCTACAATCTTAAAAATAATCACATGTTTATTTTTATATAGCAAAAAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAATCTTAAAAATAATCACATGTTTATTTTTATATAGCAAAAAA  998

seq1  GAGACTTTTACAATCCTAGATTCCGAGTTTAAAGGCAAAAACCCCTTCAC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTTACAATCCTAGATTCCGAGTTTAAAGGCAAAAACCCCTTCAC  1048

seq1  TGGAAGGTGATCCTTTAAAATAGGACTGATGCATTATTTTTAGATTGGCA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTGATCCTTTAAAATAGGACTGATGCATTATTTTTAGATTGGCA  1098

seq1  TGAAAATAGTACTTCTTAGAGAATTAGAATGGATGAAGTGATTCTTGGAA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAGTACTTCTTAGAGAATTAGAATGGATGAAGTGATTCTTGGAA  1148

seq1  AAGAATTC  1144
      ||||||||
seq2  AAGAATTC  1156