BAC Information

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BAC

Clone NameB6Ng01-293E07
Chromosome19 (Build37)
Map Location 50,087,412 - 50,088,509
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629448, Siah1-ps1
Downstream geneEG433251, Sorcs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293E07.bB6Ng01-293E07.g
ACCGA089692GA089693
length1,2251,098
definitionB6Ng01-293E07.b B6Ng01-293E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgacttgggctgagtcccgaacctttctcttttttttggttct
aattgttcctagtcctagacctggaagcttccagcctctgtataagctaa
tcttccaaactgactgattcaatccagcttttctcaggttctggctgcat
tgctctgcttggcctcatattaacattagcaatcagttctaatcttctgg
ctccttcattttctctggctcattctgccttcatctgtgtctaggttctt
ctttctgaaacttgcctctgtaaaactgttctaaacacacatcctacatc
acccctgtctctccgtgagaccccaacttaaagcatttctccctgaaagg
taaagcccctaaaatattcccccaagcttgttttccctgatctctaaata
tacagccagaaagaagctctttgttctctatagccagcaaaaagcctttt
tgtttctataccttataaccagagatgtgataattgtaaaaagacctacc
caggtgtttgcttggctccctgtgccaaggacacggagataaattccaca
aagaagagctacaactcactccctactgctcctcatgccttgtaatttta
ccaaggacattcgccagagaagaactgtagccaaactcctcccaactctt
cccaactctccttccaactcctcccaactcctcccaattcctcacttttc
ctttaaaagccccctactattatcactcggggtcgaactcccctgccctg
tgcagcaaaaggtgttcgtcctccgctagctgacaaaaaaagcctcttgc
agtttgcatcaggtgtggttttctctcgagttattggggtgccagccagc
tcttccctgggacttgagaagtctccccagtttccggggtcttacatctc
ttgttgctgttaaatagattctctttcctctgctgtctcatgcaaactgt
gtgtatcctaactcggactcatctgtcaaatctctctctgattctcactt
tgcctctcaactagacatcaatttcaaacatggccgcttccctctacaac
taacttaggataaagatgcataataggtcatgtctatatttccaggctat
atcatactgtattccaaggcatgtcctgccattctggttcaattcaatat
agatctgaagatctgattgatcttgacaggagacagcatggtgttgctgt
ggaaatataaaatatattcccctag

gaattcaataatatgtgtcagtgttctgagaaatggaaatgagtatcttc
aaagggacatgtgttttcagtacaaaagccgttgacagcatgcactggca
aaatcctgtgccaggagaggcaccatcctccacagggctaagctcagaac
acacagagagaaagaccaggataggctggccgttgttcaaagatttcccc
agactgactcagatataagagagtgtctggtgatcacagagtaagggaaa
attccctgcttgcagcacacttatatctagtatgtttttaccaggagaag
gaaaagagttggagaaaaaaaacaaaaaaaacaaatgaacaacagttcct
gatagtgtgtgcatttgattgactccttcattttgctatgcacttttact
tggaggcattggttaggttttctgtaagctatagcaagaaggggaaagaa
ggttccagtgctcctggctacagggctctcagggtgtggttgtgtttctg
tacgcttctaggtatcatttctatcaacctagctccgtaacacattgcag
tgtgcagtcttggctgaatactgagactttcattgaaatgggtgttttga
tatgttaaaaaaaattcatagatatactgaggtgcagtctacttctggaa
aataatcaatggaaatttatcatctttcattacatgaagaaagtgagaac
aattcataaattctgattccttatgtaaagtgatataatactttgcatgt
aatccatgtaaagccccgtgtatatatagtcttcaaggtaactttttatc
tactgtaattgtaaatatataaatatttgttgtatttatacaataagaaa
gtagcctatatcacgtttttctgtctcctggacagttgaatttgtcaatg
cagaaactcagaaatgtaaaggtctgcctgcaatagtgattctgttgaca
gtctaaccgaaaaccattcacagatttccacagcatacacactactggct
ataagctaattgatttgttacagaggtcataatagttgatgccagccctc
attcgtgacctgtgtttggctcaggagggtagaaagggcaaacactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_50087412_50088509
seq2: B6Ng01-293E07.g_67_1164 (reverse)

seq1  CCAGTGTTT-CCCTTTCTACCCTTCCTGAGCCAAACACAGGTTCACGGAT  49
      ||||||||| |||||||||||| |||||||||||||||||| ||||| ||
seq2  CCAGTGTTTGCCCTTTCTACCC-TCCTGAGCCAAACACAGG-TCACGAAT  48

seq1  G-GGGCTGCCATCAACCTATTATGACCTCTGTAACAAAACCAAATTTAGC  98
      | |||||| |||||| |||||||||||||||||||||| |   | |||||
seq2  GAGGGCTGGCATCAA-CTATTATGACCTCTGTAACAAATC---AATTAGC  94

seq1  TTATAACCAGTAGTGTGTATGCTGTGGAAATCTGTGAATGGTTTTCGGTT  148
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCCAGTAGTGTGTATGCTGTGGAAATCTGTGAATGGTTTTCGGTT  144

seq1  AGACTGTCAACAGAATTCACTA-TGCAGGCAGACCTTTACATTTCTG-GG  196
      ||||||||||||||| |||||| |||||||||||||||||||||||| | 
seq2  AGACTGTCAACAGAA-TCACTATTGCAGGCAGACCTTTACATTTCTGAGT  193

seq1  TTCTGCATTGACAAATTCAACTGTCCAGGAGACAG-AAAACGTGATATAG  245
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTGCATTGACAAATTCAACTGTCCAGGAGACAGAAAAACGTGATATAG  243

seq1  GCTACTTTCTTATTGTATAAATACAACAAATATTTATATATTTAC-ATTA  294
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTACTTTCTTATTGTATAAATACAACAAATATTTATATATTTACAATTA  293

seq1  CAGTAGAT-AAAAGTTACCTTGAAGACTATATATACACGGGGCTTTACAT  343
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATAAAAAGTTACCTTGAAGACTATATATACACGGGGCTTTACAT  343

seq1  GGATTACATGCAAAGTATTATATCACTTTACATAAGGAATCAGAATTTTT  393
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGATTACATGCAAAGTATTATATCACTTTACATAAGGAATCAGAATTTAT  393

seq1  GAATTGTTCTCACTTTCTTCATGTAATGAAAGATGATAAATTTCCATTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTCTCACTTTCTTCATGTAATGAAAGATGATAAATTTCCATTGA  443

seq1  TTATTTTCCAGAAGTAGACTGCACCTCAGTATATCTATGAATTTTTTTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCAGAAGTAGACTGCACCTCAGTATATCTATGAATTTTTTTTA  493

seq1  ACATATCAAAACACCCATTTCAATGAAAGTCTCAGTATTCAGCCAAGACT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAAAACACCCATTTCAATGAAAGTCTCAGTATTCAGCCAAGACT  543

seq1  GCACACTGCAATGTGTTACGGAGCTAGGTTGATAGAAATGATACCTAGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTGCAATGTGTTACGGAGCTAGGTTGATAGAAATGATACCTAGAA  593

seq1  GCGTACAGAAACACAACCACACCCTGAGAGCCCTGTAGCCAGGAGCACTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTACAGAAACACAACCACACCCTGAGAGCCCTGTAGCCAGGAGCACTG  643

seq1  GAACCTTCTTTCCCCTTCTTGCTATAGCTTACAGAAAACCTAACCAATGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCTTTCCCCTTCTTGCTATAGCTTACAGAAAACCTAACCAATGC  693

seq1  CTCCAAGTAAAAGTGCATAGCAAAATGAAGGAGTCAATCAAATGCACACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGTAAAAGTGCATAGCAAAATGAAGGAGTCAATCAAATGCACACA  743

seq1  CTATCAGGAACTGTTGTTCATTTGTTTTTTTTGTTTTTTTTCTCCAACTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGAACTGTTGTTCATTTGTTTTTTTTGTTTTTTTTCTCCAACTC  793

seq1  TTTTCCTTCTCCTGGTAAAAACATACTAGATATAAGTGTGCTGCAAGCAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCTCCTGGTAAAAACATACTAGATATAAGTGTGCTGCAAGCAG  843

seq1  GGAATTTTCCCTTACTCTGTGATCACCAGACACTCTCTTATATCTGAGTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTCCCTTACTCTGTGATCACCAGACACTCTCTTATATCTGAGTC  893

seq1  AGTCTGGGGAAATCTTTGAACAACGGCCAGCCTATCCTGGTCTTTCTCTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGGGAAATCTTTGAACAACGGCCAGCCTATCCTGGTCTTTCTCTC  943

seq1  TGTGTGTTCTGAGCTTAGCCCTGTGGAGGATGGTGCCTCTCCTGGCACAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTCTGAGCTTAGCCCTGTGGAGGATGGTGCCTCTCCTGGCACAG  993

seq1  GATTTTGCCAGTGCATGCTGTCAACGGCTTTTGTACTGAAAACACATGTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGCCAGTGCATGCTGTCAACGGCTTTTGTACTGAAAACACATGTC  1043

seq1  CCTTTGAAGATACTCATTTCCATTTCTCAGAACACTGACACATATTATTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAAGATACTCATTTCCATTTCTCAGAACACTGACACATATTATTG  1093

seq1  AATTC  1098
      |||||
seq2  AATTC  1098


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