BAC Information

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BAC

Clone NameB6Ng01-303F11
Chromosome19 (Build37)
Map Location 13,439,143 - 13,440,273
singlet/doubletsinglet
Overlap geneOlfr1467
Upstream geneOlfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466
Downstream geneOlfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303F11.bB6Ng01-303F11.g
ACCGA097165GA097166
length1,1361,145
definitionB6Ng01-303F11.b B6Ng01-303F11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaacatcctgattgaaattctatataagcaactcctatttta
gaaattcagatatgtatttctgaacaaaacttttttttgtttgttactgt
aaaacaatatttcctagaacttgtacaaaaggtatatttaaacataactg
aataactagatactatcaggaaagaatgaatccaagttatcatgagtctc
tgaagtgagaagtcatagtcataaatatcatgttgtctgtaaaatgatct
ttttgagtgcactcttcacttccttattcctcaagctgtagaccagaggg
ttcagcatggggatgaccatggtgtagaacaccgaggcaattttatctgt
gtccatagagtgattggaacttggctgtacatacataaaaatactagttc
catagaaaatggagactgcagtgaagtgggaggcacaggtggatatagcc
ttgtgatgtcctgcagctgattgcatcttcacgatggtgacaaaaatgaa
cacataggatatccaaataactataaaggcaaaaaatatgtggaagctca
ctatgtatacaagaaccagctcactggcatatctgtcagaacaagagaga
accatgactgctggaatatcacagaaaaagtgatggacaacattagattc
acagaaataaaggtgaaatgtatctcctatgtggatggaggcattcatga
aaccaatgacataagagccaatgatcagccacgtacacacacttgtagtc
atggtggtggtataatgtagtggtttacacactgctgcatagcgatcata
ggccattgaggccaacaggtaattctccacagtaataaatgctgcaaaaa
tgaacatctgagcagcacagtcattgtaggaaatgactttgtctcctata
agaaaaccaggacatgacttttgggagtgactgctgaagagtaacaaaag
tctaccagagataagttacctagaaaaaaagtacatgggagtgtggagcc
cgagagtccatgagaatcacaggatcatccccagattccccacaccggtg
attgtataaatagcaagaaaatgtgatgagagtggaaatttgagttctgg
ggttcatccggtggagtccagcaggataactctgtc
gaattcatcagcacaggggtaaattttcctgaagagaaaaaacagtgtct
cagattctaagatcaacaattgacaaatgggacctcatgaaacggaaaat
aacgtgtacggcaaaggacacctgttaataggacaaaacagcaacctaca
cattggtaaaagatctttaccaatgctacatgtgttagagggctaacata
aaatatatacaaataaccaaagaagctagactccagagggctaagtagcc
ctaattaaaaatggggtacaaactaagcaaagaattctcaactgaggaat
ctctaatgatcaagaagcatgcgaagaaatgttcaacatccttaattatc
aggaaaatggaaatcaaaacgaccatgaccttccacctcacaccaatcag
aatgactaagatgaaaaaacaaaacaaaacaaaaaacaaacaaacaaaca
aaaaaactaagacaacatcagttgctggcaaggatgtggagaaataggaa
cacccctccattgctggtgagattacatgctggtaaaaccacttctgata
tcaatctggaagttcttcagaaaattggacattgtgctaccatctcaccc
agctataccactccttggcatatccccaaaatatgccccaagatataaga
aggattctatgtccatagcagccttatttataatagccagaagctgaaaa
caacccaggtgtccctcaatggaagaatggatacagaaaatgtgcattta
cacaatggagtgcaactcaactattaaaaacaatgacttcatgaaatttt
caggtaaatgtttggaacaagaaaatatcatcctgagtgaggcaacccag
acacaaaaggacatacataatatgtatggtttgataagtggatattagtc
caaaagctcagaaacccacaatacaactcatagattattatgaaccttaa
aaaggaaagaccatcatagtgtggatgcttcagtctacttagaacgggga
gcaaatgatcacaggaagttagagggagaggagggacatggagggaagag
aagaaagggcagggggcagaatcagcttctgtagaacagaggagtcgagt
cagaaatgaaatatggagtaccttatgtttgtacttaattataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13439143_13440273
seq2: B6Ng01-303F11.b_43_1178 (reverse)

seq1  GACAGAGTTTATCCTGCTGGGACT-CACC-GATGA--CCCAGAACTTCAA  46
      ||||||| |||||||||| ||||| |||| |||||  |||||||||  ||
seq2  GACAGAG-TTATCCTGCT-GGACTCCACCGGATGAACCCCAGAACTCAAA  48

seq1  ATTCCACTCTTCATCACA-TTTCTTGCTATTTATACAATCACCGTGGTGG  95
       |||||||| |||||||| |||||||||||||||||||||||||  ||||
seq2  TTTCCACTC-TCATCACATTTTCTTGCTATTTATACAATCACCGGTGTGG  97

seq1  GGAATCTGGGGATGATCCTGTTGATTCTCATGGACTCTC-GGCTCCACAC  144
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  GGAATCTGGGGATGATCCTG-TGATTCTCATGGACTCTCGGGCTCCACAC  146

seq1  TCCCATGTAC-TTTTTTCTAGGTAACTTATCTCTGGTAGACTTTTGTTAC  193
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTACTTTTTTTCTAGGTAACTTATCTCTGGTAGACTTTTGTTAC  196

seq1  TCTTCAGCAGTCACT-CCAAAAGTCATGT-CTGGTTTTCTTATAGGAGAC  241
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  TCTTCAGCAGTCACTCCCAAAAGTCATGTCCTGGTTTTCTTATAGGAGAC  246

seq1  AAAGTCATTTCCTACAATGACTGTGCTGCTCAGATGTTCATTTTTGCAGC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTTCCTACAATGACTGTGCTGCTCAGATGTTCATTTTTGCAGC  296

seq1  ATTTATTACTGTGGAGAATTACCTGTTGGCCTCAATGGCCTATGATCGCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTACTGTGGAGAATTACCTGTTGGCCTCAATGGCCTATGATCGCT  346

seq1  ATGCAGCAGTGTGTAAACCACTACATTATACCACCACCATGACTACAAGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCAGTGTGTAAACCACTACATTATACCACCACCATGACTACAAGT  396

seq1  GTGTGTACGTGGCTGATCATTGGCTCTTATGTCATTGGTTTCATGAATGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACGTGGCTGATCATTGGCTCTTATGTCATTGGTTTCATGAATGC  446

seq1  CTCCATCCACATAGGAGATACATTTCACCTTTATTTCTGTGAATCTAATG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCACATAGGAGATACATTTCACCTTTATTTCTGTGAATCTAATG  496

seq1  TTGTCCATCACTTTTTCTGTGATATTCCAGCAGTCATGGTTCTCTCTTGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATCACTTTTTCTGTGATATTCCAGCAGTCATGGTTCTCTCTTGT  546

seq1  TCTGACAGATATGCCAGTGAGCTGGTTCTTGTATACATAGTGAGCTTCCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGATATGCCAGTGAGCTGGTTCTTGTATACATAGTGAGCTTCCA  596

seq1  CATATTTTTTGCCTTTATAGTTATTTGGATATCCTATGTGTTCATTTTTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTTGCCTTTATAGTTATTTGGATATCCTATGTGTTCATTTTTG  646

seq1  TCACCATCGTGAAGATGCAATCAGCTGCAGGACATCACAAGGCTATATCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATCGTGAAGATGCAATCAGCTGCAGGACATCACAAGGCTATATCC  696

seq1  ACCTGTGCCTCCCACTTCACTGCAGTCTCCATTTTCTATGGAACTAGTAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCCTCCCACTTCACTGCAGTCTCCATTTTCTATGGAACTAGTAT  746

seq1  TTTTATGTATGTACAGCCAAGTTCCAATCACTCTATGGACACAGATAAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTATGTACAGCCAAGTTCCAATCACTCTATGGACACAGATAAAA  796

seq1  TTGCCTCGGTGTTCTACACCATGGTCATCCCCATGCTGAACCCTCTGGTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCGGTGTTCTACACCATGGTCATCCCCATGCTGAACCCTCTGGTC  846

seq1  TACAGCTTGAGGAATAAGGAAGTGAAGAGTGCACTCAAAAAGATCATTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTGAGGAATAAGGAAGTGAAGAGTGCACTCAAAAAGATCATTTT  896

seq1  ACAGACAACATGATATTTATGACTATGACTTCTCACTTCAGAGACTCATG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAACATGATATTTATGACTATGACTTCTCACTTCAGAGACTCATG  946

seq1  ATAACTTGGATTCATTCTTTCCTGATAGTATCTAGTTATTCAGTTATGTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGGATTCATTCTTTCCTGATAGTATCTAGTTATTCAGTTATGTT  996

seq1  TAAATATACCTTTTGTACAAGTTCTAGGAAATATTGTTTTACAGTAACAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATACCTTTTGTACAAGTTCTAGGAAATATTGTTTTACAGTAACAA  1046

seq1  ACAAAAAAAAGTTTTGTTCAGAAATACATATCTGAATTTCTAAAATAGGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAAGTTTTGTTCAGAAATACATATCTGAATTTCTAAAATAGGA  1096

seq1  GTTGCTTATATAGAATTTCAATCAGGATGTTGATGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTATATAGAATTTCAATCAGGATGTTGATGAATTC  1136