BAC Information

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BAC

Clone NameB6Ng01-305B05
Chromosome19 (Build37)
Map Location 19,193,103 - 19,349,602
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
Downstream geneLOC100042218, LOC100041541
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305B05.bB6Ng01-305B05.g
ACCGA098457GA098458
length552855
definitionB6Ng01-305B05.b B6Ng01-305B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,193,103 - 19,193,660)(19,348,719 - 19,349,602)
sequence
cacttaggccaccattagtcattgtaactctacacatgtttggatctctg
gaaaatagttttgtcattaatttatatcaccaacattcatttggattgtc
cccaacttcagcttttttttttttttaacttttcttgcatttcctcttgg
gatatgggatattttcaagctactgtttcttggtcctttttagtagattg
ctgctgttaaatgttctcaggcactgatgtcataggaacatctgtattgc
tttacttttaaaatatgttcctggtaactttgttttttaacatgttattc
atactattctaccgtaatctgttttatatgactctgagtaagagtcaact
gtcaggtgtaagattgtccctttgaagagagagaatgtgtcttctttttg
gtccctcttgtgacttttttcttgtcatttctcagctgttttactgtgat
gggcttagggataatttttcttttcttctcttttcttgattattttaata
agagaatattcatttgaaatattttatttttgtattttaagtgtgtttgt
gt
gaattctataattgttgctgctgctgttgctatttcaggagattacacac
aatcatataatatatatatatatatatatatatatatatatatatatatg
tatgtatgtgtatatatatatatatatatatatatatatatatatatata
tatatatatacagatatatatatatatatatagaaataaataataaaata
gaatttaaatcttccaaaatagctgctaagactttgaatgtgagaatcct
attcaacatatagtcacctgcataaacaatggcccctatgtgcctgtacc
aatttagaggtatggagcatgtttgcttgggcacataggtctctggacaa
ggccctagaggtgtgttacacttggttgctttacatctctctctgttcct
gacggtcatgatgctaatttctctgacatatccttcttactatgatgcat
aatgaattctctaaaacttcaagtaaatacaattttctcctttaaattgt
cccttggatatttagtgccaatgatacaaagtctgattatcaaagaggta
tatttcatagttactattgagtcctgattattagaacagttacataatta
atcatatgactagcttgagttgtagttcgacttgtggtacacagaacttc
agaatacttctatgaactgaccttataagtaagtttcatggtgaggctaa
tgcagatgacagaatgttatcattaagatgtcatctacatcatgtgagat
atcttttctagatactctggcagcagccttctatattgaagcaatgtgta
tgtttctcatgtttgatagtagtcatgatactgctattctaacctaaaca
tatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_19193103_19193660
seq2: B6Ng01-305B05.b_41_598

seq1  GAATTCCACTTAGGCCACCATTAGTCATTGTAACTCTACACATGTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTAGGCCACCATTAGTCATTGTAACTCTACACATGTTTGGA  50

seq1  TCTCTGGAAAATAGTTTTGTCATTAATTTATATCACCAACATTCATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAAAATAGTTTTGTCATTAATTTATATCACCAACATTCATTTGG  100

seq1  ATTGTCCCCAACTTCAGCTTTTTTTTTTTTTTAACTTTTCTTGCATTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCCCAACTTCAGCTTTTTTTTTTTTTTAACTTTTCTTGCATTTCC  150

seq1  TCTTGGGATATGGGATATTTTCAAGCTACTGTTTCTTGGTCCTTTTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGATATGGGATATTTTCAAGCTACTGTTTCTTGGTCCTTTTTAGT  200

seq1  AGATTGCTGCTGTTAAATGTTCTCAGGCACTGATGTCATAGGAACATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTGCTGTTAAATGTTCTCAGGCACTGATGTCATAGGAACATCTG  250

seq1  TATTGCTTTACTTTTAAAATATGTTCCTGGTAACTTTGTTTTTTAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTTACTTTTAAAATATGTTCCTGGTAACTTTGTTTTTTAACATG  300

seq1  TTATTCATACTATTCTACCGTAATCTGTTTTATATGACTCTGAGTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATACTATTCTACCGTAATCTGTTTTATATGACTCTGAGTAAGAG  350

seq1  TCAACTGTCAGGTGTAAGATTGTCCCTTTGAAGAGAGAGAATGTGTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGTCAGGTGTAAGATTGTCCCTTTGAAGAGAGAGAATGTGTCTTC  400

seq1  TTTTTGGTCCCTCTTGTGACTTTTTTCTTGTCATTTCTCAGCTGTTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTCCCTCTTGTGACTTTTTTCTTGTCATTTCTCAGCTGTTTTAC  450

seq1  TGTGATGGGCTTAGGGATAATTTTTCTTTTCTTCTCTTTTCTTGATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGGGCTTAGGGATAATTTTTCTTTTCTTCTCTTTTCTTGATTATT  500

seq1  TTAATAAGAGAATATTCATTTGAAATATTTTATTTTTGTATTTTAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGAGAATATTCATTTGAAATATTTTATTTTTGTATTTTAAGTGT  550

seq1  GTTTGTGT  558
      ||||||||
seq2  GTTTGTGT  558

seq1: chr19_19348719_19349602
seq2: B6Ng01-305B05.g_65_919 (reverse)

seq1  CTATATGTTTTAAGTTTAAAATAGCAGTATTCAATACTACTATACAAAAC  50
      ||||||||||  || ||| |||||||||| |||  ||||||||   ||||
seq2  CTATATGTTT--AGGTTAGAATAGCAGTA-TCATGACTACTAT--CAAAC  45

seq1  ATTGAGAAACATACACATTGCTTCAATTATAG-AGGCTACTGCCAGAGTA  99
      | |||||||||||||||||||||||| ||||| ||||| |||||||||||
seq2  A-TGAGAAACATACACATTGCTTCAA-TATAGAAGGCTGCTGCCAGAGTA  93

seq1  TCTAGAAAAGATATCTCACAAAAGGATGTAGATGACATCTTATTTTATAA  149
      |||||||||||||||||||   | ||||||||||||||||||  | ||||
seq2  TCTAGAAAAGATATCTCAC---ATGATGTAGATGACATCTTA-ATGATAA  139

seq1  CATTTTCTGTCATCTGCATTAGCCTCACCATGAAACTTACTTATAAAGGT  199
      ||  |||||||||||||||||||||||||||||||||||||||| |||||
seq2  CA--TTCTGTCATCTGCATTAGCCTCACCATGAAACTTACTTAT-AAGGT  186

seq1  CAGTTTCATTTGAAGTTTATTCTGAAGTTCTGTGTACCACAAGTCGAACT  249
      ||| |||| | ||||  |||||||||||||||||||||||||||||||| 
seq2  CAG-TTCA-TAGAAG--TATTCTGAAGTTCTGTGTACCACAAGTCGAAC-  231

seq1  TACAACTCAAGCTTTGTCATATGATTAAATTTTATTTGTAACTGTTCTAA  299
      |||||||||||| | |||||||||||||   |||  ||||||||||||||
seq2  TACAACTCAAGC-TAGTCATATGATTAA---TTA--TGTAACTGTTCTAA  275

seq1  TAAATCAGGACCTCAATAGGTAACTATGAAATATACCTCTTTGATAATCA  349
      | |||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  T-AATCAGGA-CTCAATA-GTAACTATGAAATATACCTCTTTGATAATCA  322

seq1  GACTTTGTATCATTGGCACCAAAATATCCAAGGGACAATTTAAAGGAGAA  399
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  GACTTTGTATCATTGGCA-CTAAATATCCAAGGGACAATTTAAAGGAGAA  371

seq1  AATTGTATTTTACTTGAAGTTTTAGAGAATTCATTATGCATCATAGTAAG  449
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTA-TTTACTTGAAGTTTTAGAGAATTCATTATGCATCATAGTAAG  420

seq1  AAGGATATGTCAGAGAAATTAGCATCATGACCGTCAGGAACAGAGAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATGTCAGAGAAATTAGCATCATGACCGTCAGGAACAGAGAGAGA  470

seq1  TGTAAAGCAACCAAGTGTAACACACCTCTAGGGCCTTGTCCAGAGACCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCAACCAAGTGTAACACACCTCTAGGGCCTTGTCCAGAGACCTA  520

seq1  TGTGCCCAAGCAAACATGCTCCATACCTCTAAATTGGTACAGGCACATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAAGCAAACATGCTCCATACCTCTAAATTGGTACAGGCACATAG  570

seq1  GGGCCATTGTTTCTGCAGGTGACTATATGTTGAATAGGATTCTCACATTC  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGGCCATTGTTTATGCAGGTGACTATATGTTGAATAGGATTCTCACATTC  620

seq1  AAAGTCTTTGCAGCTATTTTGGAAGATCTAAATTCTATTCTATTATTTAT  699
      |||||||| |||||||||||||||||| ||||||||||| ||||||||||
seq2  AAAGTCTTAGCAGCTATTTTGGAAGATTTAAATTCTATTTTATTATTTAT  670

seq1  TTCATTTTTTTTCTGTTAGGTTCAGTAGAAGTATTTTTTATTATATATAT  749
      |||  | | | | | |     || ||| |  ||| | |   |||||||||
seq2  TTCTATATATATATATATATATCTGTATATATATATATATATATATATAT  720

seq1  ATATATATATATATATATATATATACACATACATACATATATATATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATACACATACATACATATATATATATAT  770

seq1  ATATATATATATATATATATATATATTATATGATTGTGTGTAATCTCCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATTATATGATTGTGTGTAATCTCCTG  820

seq1  AAATAGCAACAGCAGCAGCAACAATTATAGAATTC  884
      |||||||||||||||||||||||||||||||||||
seq2  AAATAGCAACAGCAGCAGCAACAATTATAGAATTC  855