BAC Information

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BAC

Clone NameB6Ng01-316D19
Chromosome19 (Build37)2 (Build37)
Map Location 12,645,919 - 12,645,973113,225,361 - 113,226,321
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046
Downstream gene4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316D19.bB6Ng01-316D19.g
ACCGA106681GA106682
length772961
definitionB6Ng01-316D19.b B6Ng01-316D19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,645,919 - 12,645,973)(113,225,361 - 113,226,321)
sequence
gaattctagaaagtgtttaatatctatgtttctgtcttcacccatttttc
attgagcagagagttggtcagttcccatgagtttctaagctttctgttgt
gtctcctattggtgatgcccagctttaatctgcagtgggatgataagata
catttcaattttctcttactcgtttggacttgcttcatgagtatgtgatc
aattttggagaaagtgccctgaggtactgagaagaagatatgttcttttg
tgtttgggtgaatatctattaggtccatatggtttataactaacatttgt
taattccagcatttctgtttagtttttgtctccatgacccatctataggc
aagtatggtactgaagtctcccactatcagtgtgtgaggatcaatgtgtt
atctaagctacagtagagtttcttttacaaaagtgagtgtctctgtgaca
tagatcttaagaattaaaatgtcatctttgtagttcttctttggatgggt
attaagggtccttccccatctcttttgattagttttggtttgaagtctgt
ttggttagatattaaaatggctacaccaacttgcttcttggacctatttg
atttgtacagcttttttcaatgctttatccagaggtaatgtgtatccatg
acactgaggtatgcttcttggaggcagtagaaagatggattctggtttct
cattaattttgttagtctgtgtctttttattggagaattgagaccactga
tattgagagatatcaatgacca
gaattcacggcttcatgtacaaaagaattattttcattgattttaggggt
gccaaatggcagtggtggggagcatgtagctgagaaaatctgtttatctc
acggtcaggaaccaaaggaaagtaaggagaagacaagagactcagaggca
agccttcaagggctgcctccaaagaccgaagggcatcctgtctcacctta
aaggctcctttgcctcccagcggcaccattctgaggaccgaacttttaat
acatgagctttagggaaacatttgcatccaatctgtatcactccagaagg
caggactctgatgcatttattgaactagttaaactagacacagcttaggg
aagagagagtacaaattgttcttgcataccaaaaaaaaaaaaaaaaagag
tcatagcatccacatgaaatgtataaacttggtctgacacatggcagaaa
taacccatttctaaaaatacagatttgagacaatcacataaattgagcat
gacctataaattagtatcagataatactaaggacttaatctaattaagag
aggattttgagtctcagaagagtccttggaattttaaacagtgttgagac
tatgaaagactagagggacttttgaagttgtactaaatgcattttacact
atgatgtgaccacaaaggagtggaatgtggtggtttaaatgagaatgttc
gctcataggcttatatttttgaatatttggtctccggttggtgaaactgt
ttgggaaggactaggaggaatggtcttgttggagggggtgtgtctggaag
tgggctttgaagttaaaaaaaaaaaaaacccctcattattcccagtttag
ttctctctgccttgggagttcgtatctcacgatgtgagtcctcaggtact
gctcattgctgcctgctttgcgtccacagagtgaccatgaactctaatcc
tctgaaactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12645919_12645973
seq2: B6Ng01-316D19.b_764_818 (reverse)

seq1  TGGTCATTAATATCTCTCAATATCAATGGACTCAATTTCCCAATAAAAAG  50
      |||||||| |||||||||||||||| ||| |||||||  |||||||||||
seq2  TGGTCATTGATATCTCTCAATATCAGTGGTCTCAATTCTCCAATAAAAAG  50

seq1  ACACA  55
      |||||
seq2  ACACA  55

seq1: chr2_113225361_113226321
seq2: B6Ng01-316D19.g_68_1028

seq1  GAATTCACGGCTTCATGTACAAAAGAATTATTTTCATTGATTTTAGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGGCTTCATGTACAAAAGAATTATTTTCATTGATTTTAGGGGT  50

seq1  GCCAAATGGCAGTGGTGGGGAGCATGTAGCTGAGAAAATCTGTTTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGGCAGTGGTGGGGAGCATGTAGCTGAGAAAATCTGTTTATCTC  100

seq1  ACGGTCAGGAACCAAAGGAAAGTAAGGAGAAGACAAGAGACTCAGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCAGGAACCAAAGGAAAGTAAGGAGAAGACAAGAGACTCAGAGGCA  150

seq1  AGCCTTCAAGGGCTGCCTCCAAAGACCGAAGGGCATCCTGTCTCACCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAAGGGCTGCCTCCAAAGACCGAAGGGCATCCTGTCTCACCTTA  200

seq1  AAGGCTCCTTTGCCTCCCAGCGGCACCATTCTGAGGACCGAACTTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCTTTGCCTCCCAGCGGCACCATTCTGAGGACCGAACTTTTAAT  250

seq1  ACATGAGCTTTAGGGAAACATTTGCATCCAATCTGTATCACTCCAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGCTTTAGGGAAACATTTGCATCCAATCTGTATCACTCCAGAAGG  300

seq1  CAGGACTCTGATGCATTTATTGAACTAGTTAAACTAGACACAGCTTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTCTGATGCATTTATTGAACTAGTTAAACTAGACACAGCTTAGGG  350

seq1  AAGAGAGAGTACAAATTGTTCTTGCATACCAAAAAAAAAAAAAAAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGTACAAATTGTTCTTGCATACCAAAAAAAAAAAAAAAAAGAG  400

seq1  TCATAGCATCCACATGAAATGTATAAACTTGGTCTGACACATGGCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCATCCACATGAAATGTATAAACTTGGTCTGACACATGGCAGAAA  450

seq1  TAACCCATTTCTAAAAATACAGATTTGAGACAATCACATAAATTGAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATTTCTAAAAATACAGATTTGAGACAATCACATAAATTGAGCAT  500

seq1  GACCTATAAATTAGTATCAGATAATACTAAGGACTTAATCTAATTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATAAATTAGTATCAGATAATACTAAGGACTTAATCTAATTAAGAG  550

seq1  AGGATTTTGAGTCTCAGAAGAGTCCTTGGAATTTTAAACAGTGTTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTGAGTCTCAGAAGAGTCCTTGGAATTTTAAACAGTGTTGAGAC  600

seq1  TATGAAAGACTAGAGGGACTTTTGAAGTTGTACTAAATGCATTTTACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGACTAGAGGGACTTTTGAAGTTGTACTAAATGCATTTTACACT  650

seq1  ATGATGTGACCACAAAGGAGTGGAATGTGGTGGTTTAAATGAGAATGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGACCACAAAGGAGTGGAATGTGGTGGTTTAAATGAGAATGTTC  700

seq1  GCTCATAGGCTTATATTTTTGAATATTTGGTCTCCGGTTGGTGAAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATAGGCTTATATTTTTGAATATTTGGTCTCCGGTTGGTGAAACTGT  750

seq1  TTGGGAAGGACTAGGAGGAATGGTCTTGTTGGAGGGGGTGTGTCTGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGGACTAGGAGGAATGGTCTTGTTGGAGGGGGTGTGTCTGGAAG  800

seq1  TGGGCTTTGAAGTTAAAAAAAAAAAAA--CCCTCAATATTCCCAG-TTAG  847
      |||||||||||||||||||||||||||  |||||| ||||||||| ||||
seq2  TGGGCTTTGAAGTTAAAAAAAAAAAAAACCCCTCATTATTCCCAGTTTAG  850

seq1  TTCTCTCTG-CTTTGGAGTT-GTATCTCACGATGTGAGTCCTCAGGTACT  895
      ||||||||| ||| |||||| |||||||||||||||||||||||||||||
seq2  TTCTCTCTGCCTTGGGAGTTCGTATCTCACGATGTGAGTCCTCAGGTACT  900

seq1  GCTCCAATTCCTGCCTGCTTCTGCGTCCCACAGTGGTGACCATGAACTCT  945
      ||||  ||| |||||||||| ||||| ||||||  |||||||||||||||
seq2  GCTC--ATTGCTGCCTGCTT-TGCGT-CCACAG-AGTGACCATGAACTCT  945

seq1  AATCCTCTGAAACTAT  961
      ||||||||||||||||
seq2  AATCCTCTGAAACTAT  961