BAC Information

Click to search

BAC

Clone NameB6Ng01-322P23
Chromosome19 (Build37)
Map Location 22,969,541 - 22,970,331
singlet/doubletsinglet
Overlap geneTrpm3
Upstream geneEG433229, EG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322P23.bB6Ng01-322P23.g
ACCGA111692GA111693
length7931,209
definitionB6Ng01-322P23.b B6Ng01-322P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtggcagttcttggtgtggaggtatggaggaacaggaacatcc
ttgtaagaactagtttgagcataagatttcattgctggctcctacatccc
tctgctgtccatgtgtctactggcttctgcagctctagttgctagtgcct
caagttcgtgttgggatctaaagtgagctagatcttgatgttggttcacc
atatctcactctgaaattcatttcattagcttaattgttctttgaagaaa
ggcctttgacgccctctgtcctttttgcaatctgtaatgcttatgtacgt
tactgtgggcaacttaggtgtgagcatccatttacattctacgaatgacc
cactggtattgtcttaacagccaatgctgagtggtattgcttatgaattt
gacgagtctttaaaatataaggactgtgagaaaagtggtaatagtaaaat
ttaaagaaatagaaagttaagagtggataaggtgtttgaaacagaaactt
tacttcatgaaaggcaattgttgatggatactgccaaggaagttggtaaa
ctttcccatgtcagaagcactaccggatattaagtttgagacagaagaaa
gttgttattttattttattttattttattttattttattttattttactt
tgggttctatggggcaaaggaagtggcttgcattctgtttgacagcaagg
caataatgcccacctaacagaagccagtgaggattcctcccctcactagc
attgactccctgtcctggtgaggtgatacggggggggggggat
gaattctctcttgctcttcggttgttaaaagcatctgtaaccgctgttga
cagtaatcccaagtaggctgataagagaacataaggaactccgccaaccc
tgtgaggcgttggggatcctgagaaagggggtggttagttttccagttat
aaataccagcagaggaaaatgaccagtactgaagggtttaaagtttgggc
gggtccaccagagtccgcccggactctgctctgcgggtccctgtggctcc
atgtactcacagcggtccacctctcaacgccccgaggggtttggggttcc
cttggcggctggggtcgaggctgtggataaggggaaggttgtggactagg
ccactcaggaggctttatagattttagaggagccgatttagctggtggct
ccaattcaggagaagccttcaatttctcttgtaacatgagagcacaacca
caattttgagaagcaaaacccaattttaacagtgtaaacaatctattttc
tttaaaaatgaactctaaaaacattacttgctacaaagtttggctgtctg
ttcctgcacacaaacacaagaaggtgtagccgccaatatatctcaaagac
actaccctaaatcttatcttttataaatcagatttctaggataagaatta
cacagaatattacccaattcaggcgtatctttagagacctgttcccatgg
gttgtctcatgctgcatgttgtagttctaaattactctaacccagagtta
ccagttttaagtcaacttttttgttaccaatgttacaaatttttaatcat
aaccaataacttatgagccactaatctataaccaagacatataaaacata
tttatacttttgaaactatttagaaacaaaaatgaaatggccatatacat
ttgcccatttaaacctaaacaaaattcttaattttttttctagctgtaat
ttcaagagagagcacttgttcaccttgatgaatccaatttttttgtagaa
aaaacagccatcttgcctcccttaaccattagaacctttgagagctggct
ggttctctaatataagaaacaggccatttataatcatgtgcccaagcaag
gtcttcttctgagcccacttgaattcttaactatacgggttcaagctttc
catgacctatctaaatcatgctaattctgatgtgatgtggtggatgtagc
gtagaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22969541_22970331
seq2: B6Ng01-322P23.b_48_840 (reverse)

seq1  AT--CCCCCCCCCCGTATCACCTCACCAGGACAGGGAGTCAATGCTAGTG  48
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCCCCCCCCGTATCACCTCACCAGGACAGGGAGTCAATGCTAGTG  50

seq1  AGGGGAGGAATCCTCACTGGCTTCTGTTAGGTGGGCATTATTGCCTTGCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGAATCCTCACTGGCTTCTGTTAGGTGGGCATTATTGCCTTGCT  100

seq1  GTCAAACAGAATGCAAGCCACTTCCTTTGCCCCATAGAACCCAAAGTAAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACAGAATGCAAGCCACTTCCTTTGCCCCATAGAACCCAAAGTAAA  150

seq1  ATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAACAACTTTCTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAACAACTTTCTTC  200

seq1  TGTCTCAAACTTAATATCCGGTAGTGCTTCTGACATGGGAAAGTTTACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAACTTAATATCCGGTAGTGCTTCTGACATGGGAAAGTTTACCA  250

seq1  ACTTCCTTGGCAGTATCCATCAACAATTGCCTTTCATGAAGTAAAGTTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTGGCAGTATCCATCAACAATTGCCTTTCATGAAGTAAAGTTTC  300

seq1  TGTTTCAAACACCTTATCCACTCTTAACTTTCTATTTCTTTAAATTTTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAACACCTTATCCACTCTTAACTTTCTATTTCTTTAAATTTTAC  350

seq1  TATTACCACTTTTCTCACAGTCCTTATATTTTAAAGACTCGTCAAATTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCACTTTTCTCACAGTCCTTATATTTTAAAGACTCGTCAAATTCA  400

seq1  TAAGCAATACCACTCAGCATTGGCTGTTAAGACAATACCAGTGGGTCATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAATACCACTCAGCATTGGCTGTTAAGACAATACCAGTGGGTCATT  450

seq1  CGTAGAATGTAAATGGATGCTCACACCTAAGTTGCCCACAGTAACGTACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAATGTAAATGGATGCTCACACCTAAGTTGCCCACAGTAACGTACA  500

seq1  TAAGCATTACAGATTGCAAAAAGGACAGAGGGCGTCAAAGGCCTTTCTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTACAGATTGCAAAAAGGACAGAGGGCGTCAAAGGCCTTTCTTC  550

seq1  AAAGAACAATTAAGCTAATGAAATGAATTTCAGAGTGAGATATGGTGAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAATTAAGCTAATGAAATGAATTTCAGAGTGAGATATGGTGAAC  600

seq1  CAACATCAAGATCTAGCTCACTTTAGATCCCAACACGAACTTGAGGCACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCAAGATCTAGCTCACTTTAGATCCCAACACGAACTTGAGGCACT  650

seq1  AGCAACTAGAGCTGCAGAAGCCAGTAGACACATGGACAGCAGAGGGATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTAGAGCTGCAGAAGCCAGTAGACACATGGACAGCAGAGGGATGT  700

seq1  AGGAGCCAGCAATGAAATCTTATGCTCAAACTAGTTCTTACAAGGATGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCAGCAATGAAATCTTATGCTCAAACTAGTTCTTACAAGGATGTT  750

seq1  CCTGTTCCTCCATACCTCCACACCAAGAACTGCCACTGAATTC  791
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCTCCATACCTCCACACCAAGAACTGCCACTGAATTC  793