BAC Information

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BAC

Clone NameB6Ng01-326I08
Chromosome19 (Build37)
Map Location 45,694,239 - 45,695,043
singlet/doubletsinglet
Overlap geneFbxw4
Upstream genePax2, LOC383450, LOC100042752, 6030443O07Rik, Sema4g, Mrpl43, Peo1, Lzts2, Pdzd7, EG435601, LOC100042760, Sfxn3, Kazald1, Tlx1, Lbx1, Btrc, EG627889, Poll, 5330431N19Rik
Downstream geneFgf8, Npm3, Mgea5, E330018D03Rik, Kcnip2, 9130011E15Rik, EG627939, 4930505N22Rik, Hps6, Ldb1, Pprc1, Nolc1, Elovl3, Pitx3, Gbf1, LOC668094, Nfkb2, Psd, Fbxl15, Cuedc2, 2310034G01Rik, Tmem180, Actr1a, Sufu, Trim8, Arl3, Sfxn2, D19Wsu162e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I08.bB6Ng01-326I08.g
ACCGA114311GA114312
length269811
definitionB6Ng01-326I08.b B6Ng01-326I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgggaacttttcagagggtatataaatgctagaaccctgataggtgggat
aggaagttggttgtttgagggggttggttttgatttgttagtagtcctgc
tcaaagaagcaacaagaagaaaaaaaattatattcagggattctctctcc
ctctctccctctctctccttccctccagttttcccttcctccctccccct
ctcttgccccctctcttgctctcttgctctggttctctctcccctctatt
cttctttctctcctatcta
gaattctgctgatataatagtttcctgtgtttgtgaatctcttctatatg
ttgtcctctgacctccacgttcgtgctgtggcatacgtgtgccagccatg
gcatacacagaaacacacacacacacacacacacacacacacacacacac
acacacgtgcgcatacacacacacaagattaaaatgtttaaaatagccac
agggccgaagatatagctcagttggtttggacctgtgtttgatcttcaga
acacgtgtttgaagagggggcggggagggagagagggaggctaaggaaag
gaagaagcagaactgggtctaagtagctcattctcggaacaccagcaggg
aggagggggagcaggcgggccacttgggctggctaactggcagctagtct
ggcctagttggtgagcttcaggctattgagagaccgtgtcgcaaacaaga
tggtggctgaagaatgaacactcaagagttcataataaaccacagtgatg
gtttctttaaggagtcagggtctttctatttggtcctgactgtcctggaa
ctagctatgtaggcctggctgcctcagactcacacagtctccagcctctg
ctgcccaggtgttgggttaaaggtgtgaacccaccacgcccagttagggt
atactcactttaaatgtacagctcccctggactctgtccacagttttaga
attgtgtatcatattttcagtttcagaaaattgttatccccctccccaag
agtcctttcttttgttcctgggtacgtgtgtgtttgtgtctgtgtgtgtg
tgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_45694239_45695043
seq2: B6Ng01-326I08.g_69_879 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACGT-CCCAGGAAC-  48
      |||||||| ||||||||||||| ||||| |||||||||| ||||||||| 
seq2  CACACACA-ACACACACACACAGACACAAACACACACGTACCCAGGAACA  49

seq1  AAAGAAAGG-CTCTTGGGGAGGGGGATAACAATTTTCTGAAACTG-AAAT  96
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGAAAGGACTCTTGGGGAGGGGGATAACAATTTTCTGAAACTGAAAAT  99

seq1  ATGATACACAATTCTAAAACTGTGGACAGAGTCCA-GGGAGCTGTACATT  145
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGATACACAATTCTAAAACTGTGGACAGAGTCCAGGGGAGCTGTACATT  149

seq1  TAAAGTGAGTATA-CCTAACTGGGCGTGGT-GGTTCACACCTTTAACCCA  193
      ||||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  TAAAGTGAGTATACCCTAACTGGGCGTGGTGGGTTCACACCTTTAACCCA  199

seq1  ACACCTGGGCAGCAGAGGCTGGAGACTGTGTGAGTCTGAGGCAGCCAGGC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGGGCAGCAGAGGCTGGAGACTGTGTGAGTCTGAGGCAGCCAGGC  249

seq1  CTACATAGCTAGTTCCAGGACAGTCAGGACCAAATAGAAAGACCCTGACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGCTAGTTCCAGGACAGTCAGGACCAAATAGAAAGACCCTGACT  299

seq1  CCTTAAAGAAACCATCACTGTGGTTTATTATGAACTCTTGAGTGTTCATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAGAAACCATCACTGTGGTTTATTATGAACTCTTGAGTGTTCATT  349

seq1  CTTCAGCCACCATCTTGTTTGCGACACGGTCTCTCAATAGCCTGAAGCTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCACCATCTTGTTTGCGACACGGTCTCTCAATAGCCTGAAGCTC  399

seq1  ACCAACTAGGCCAGACTAGCTGCCAGTTAGCCAGCCCAAGTGGCCCGCCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTAGGCCAGACTAGCTGCCAGTTAGCCAGCCCAAGTGGCCCGCCT  449

seq1  GCTCCCCCTCCTCCCTGCTGGTGTTCCGAGAATGAGCTACTTAGACCCAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCTCCTCCCTGCTGGTGTTCCGAGAATGAGCTACTTAGACCCAG  499

seq1  TTCTGCTTCTTCCTTTCCTTAGCCTCCCTCTCTCCCTCCCCGCCCCCTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCTTCCTTTCCTTAGCCTCCCTCTCTCCCTCCCCGCCCCCTCT  549

seq1  TCAAACACGTGTTCTGAAGATCAAACACAGGTCCAAACCAACTGAGCTAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACGTGTTCTGAAGATCAAACACAGGTCCAAACCAACTGAGCTAT  599

seq1  ATCTTCGGCCCTGTGGCTATTTTAAACATTTTAATCTTGTGTGTGTGTAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGGCCCTGTGGCTATTTTAAACATTTTAATCTTGTGTGTGTGTAT  649

seq1  GCGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  699

seq1  TTCTGTGTATGCCATGGCTGGCACACGTATGCCACAGCACGAACGTGGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTATGCCATGGCTGGCACACGTATGCCACAGCACGAACGTGGAG  749

seq1  GTCAGAGGACAACATATAGAAGAGATTCACAAACACAGGAAACTATTATA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGACAACATATAGAAGAGATTCACAAACACAGGAAACTATTATA  799

seq1  TCAGCAGAATTC  805
      ||||||||||||
seq2  TCAGCAGAATTC  811