BAC Information

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BAC

Clone NameB6Ng01-331N09
Chromosome19 (Build37)
Map Location 20,227,072 - 20,227,646
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042218
Downstream geneLOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331N09.bB6Ng01-331N09.g
ACCGA118102GA118103
length1,002609
definitionB6Ng01-331N09.b B6Ng01-331N09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatgacaacaaccctgagat
tccatctcacaccagtcagaatggctaagacaaaaaattcaggtgacagc
agatgctggctaggatgtggagaaagaggaacactcctccattgttggtg
ggtttgcaagcttgtacaaccactctggaaatcagtctggcagttcctta
gaaaattggacatagtactaccagaggatccagcaatacctcttctgggc
atatatccagaagatgtcctaaccggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaata
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaagtgacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgcgaaacacatgaagcttgg
gaagaatgaagaccaaagtgtggacactttgtccccttcttagaattggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatctagagactgccttgtttcatttcttaaaaataaa
aaagaaaagaaaagaaaaaaaaaaaccttcctgtgatttaggcactgtat
aagaaagctttgttggctcatactacacaatgctgataacacgcctaatt
taaattggttgtattggaaacaagaagatattttgttttagacatttatg
gtaataatacattctttattcttctatataaacatattcacactttatat
tc
gaattccacagtgttttatctacatctgccttcctattttcagcccaact
ctttgatcctccctagaaacttaacagcttatgaactaagaaaatatttg
aacattttaaaaagcgcttcttggccatttgagattcctctgttgagagt
tctctgttacattctgtacctcatattttaattgggatatttgggttatt
gatgtctaatttcttgagctctttataaattttggatattagccctctgt
catatgtaggattggtggagatcccgtcccaatctgtgtaggctgcagat
tttccctattgacagtgtcctttgccttacagaagatttgcagcttcatg
aggtcttatatagcaattgttgaccttagagcctaggccattggtgttct
gctcagaaacttgtctcctgtacttactccttactcctgcattcaatggt
atctcctacttttcttctcttttcttttcttttctttttttttcttttct
tttcttttcttttcttttcctttcctttcctttcctttcctttcttttcc
tttcctttcttttttttttttttttttggggggggggttccagacacggt
ttctctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20227072_20227646
seq2: B6Ng01-331N09.g_69_638

seq1  GAATTCCACAGTGTTTTATCTACATCTGCCTTCCTATTTTCAGCCCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGTGTTTTATCTACATCTGCCTTCCTATTTTCAGCCCAACT  50

seq1  CTTTGATCCTCCCTAGAAACTTAACAGCTTATGAACTAAGAAAATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCCTCCCTAGAAACTTAACAGCTTATGAACTAAGAAAATATTTG  100

seq1  AACATTTTAAAAAGCGCTTCTTGGCCATTTGAGATTCCTCTGTTGAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAAAAAGCGCTTCTTGGCCATTTGAGATTCCTCTGTTGAGAGT  150

seq1  TCTCTGTTACATTCTGTACCTCATATTTTAATTGGGATATTTGGGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTACATTCTGTACCTCATATTTTAATTGGGATATTTGGGTTATT  200

seq1  GATGTCTAATTTCTTGAGCTCTTTATAAATTTTGGATATTAGCCCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTAATTTCTTGAGCTCTTTATAAATTTTGGATATTAGCCCTCTGT  250

seq1  CATATGTAGGATTGGTGGAGATCCCGTCCCAATCTGTGTAGGCTGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAGGATTGGTGGAGATCCCGTCCCAATCTGTGTAGGCTGCAGAT  300

seq1  TTTCCCTATTGACAGTGTCCTTTGCCTTACAGAAGATTTGCAGCTTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATTGACAGTGTCCTTTGCCTTACAGAAGATTTGCAGCTTCATG  350

seq1  AGGTCTTATATAGCAATTGTTGACCTTAGAGCCTAGGCCATTGGTGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTATATAGCAATTGTTGACCTTAGAGCCTAGGCCATTGGTGTTCT  400

seq1  GCTCAGAAACTTGTCTCCTGTACTTACTCCTTACTCCTGCATTCAATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAACTTGTCTCCTGTACTTACTCCTTACTCCTGCATTCAATGGT  450

seq1  ATCTCCTACTTTTCTTCTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTACTTTTCTTCTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCT  500

seq1  TTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCT  550
      |||||||||||||||     ||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCT-----TTTCCTTTCCTTTCCTTTCCTTTCCTTTCT  545

seq1  TTTCCTTTCCTTTCTTTTTTTTTTT  575
      |||||||||||||||||||||||||
seq2  TTTCCTTTCCTTTCTTTTTTTTTTT  570