BAC Information

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BAC

Clone NameB6Ng01-332M22
Chromosome19 (Build37)
Map Location 6,125,014 - 6,126,067
singlet/doubletsinglet
Overlap geneSnx15
Upstream geneLOC383424, Pacs1, Sf3b2, Gal3st3, EG631868, Catsper1, Cst6, Banf1, 2010003J03Rik, Sart1, Tsga10ip, EG622178, Drap1, AI837181, LOC383425, Fosl1, Ccdc85b, Fibp, Ctsw, Efemp2, Mus81, Cfl1, B930037P14Rik, 1700020D05Rik, Ovol1, Gm962, Rnaseh2c, Htatip, Rela, Sipa1, Pcnxl3, Map3k11, Kcnk7, Ehbp1l1, Mtvr2, Sssca1, Ltbp3, Scyl1, 2310043N10Rik, 1200004M23Rik, Slc25a45, Tigd3, Dpf2, Cdc42ep2, Pola2, Slc22a20, Capn1, EG666300, Syvn1, Mrpl49, Fau, Znhit2, Tm7sf2, 1110014N23Rik, LOC100039773, Zfpl1, Cdca5, Gm550, Naaladl1, Sac3d1
Downstream geneArl2, EG433216, Batf2, LOC622554, Gpha2, Ppp2r5b, 1810013C15Rik, Ehd1, Cdc42bpg, Men1, Map4k2, Sf1, Pygm, Rasgrp2, Nrxn2, Slc22a12, LOC629372, Rps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332M22.bB6Ng01-332M22.g
ACCGA118806GA118807
length1,07071
definitionB6Ng01-332M22.b B6Ng01-332M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagcctctggaagagcagcagtgttcttagctgctgagtcatc
tctccatcatctcccaactttattatttttttttaattggcgggtttttt
ttcctttttttttttttttttttaagcagtgacaaggctcccctctgtag
ccctggcaggcctagaactgcctagaacctgctttgacggttaggttggc
ttcaaagtcacagagatgtggctgcttctgcttcttaagtggggtaaaga
cactcacccctaggcttggcactcaacttctatcccagttcctccctagg
gccacgtcctggtattcagaaaggaaaacaaaacaaaacaaaacaaaact
atgcttctcaggaaatgagagtctaggggctggagagatggttcctggag
agatggcttggcagttaagagcactggctgtgtcaaacaccgatgcacag
aaaataaagtaaaaataaataaatcatttaaaaaaaatgagagtctgtcc
caggatccagttcttcttaagagaggagctacgggctggtgaaaggtccg
gagttcaaatcccagcaaccacatggtggctcacaaccatccgtagcaag
atctgatgccctcttctggagtgtctgaagacagctacagtgtacttaca
tataataaataaataaatctttaaaaaaaaaaagagaggagctacaatgt
ctcatacccatgaagacagagttagcagtggggttgggcactctggaaga
acagaattggcccgagacagaagtaacacttagtttttgctattatgctt
atgggagttttacagtaaggttgtacagtttagaatcaacagttttcaaa
acatcctttccatttttttttttctagatctcagcaaaccagacatgatt
aagaatgcctcatttaaaatcctaaggatggggacaagggagggggttgg
ctcgggtagttaagaagcatgaacctgatctttccaagccactacattca
gtgcccagaacagttacctcacattaatgtggctcaatatcgttgtattc
tggcctccaggggaatcaga
actctgtagaccaggctggcctcaaactcagagagatctgattgtctctg
cctgagtgctggggttaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_6125014_6126067
seq2: B6Ng01-332M22.b_45_1114

seq1  GAATTCAGAGCCTCTGGAAGAGCAGCAGTGTTCTTAGCTGCTGAGTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCCTCTGGAAGAGCAGCAGTGTTCTTAGCTGCTGAGTCATC  50

seq1  TCTCCATCATCTCCCAACTTTATTATTTTTTTTTAATTGGCGGGTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCATCTCCCAACTTTATTATTTTTTTTTAATTGGCGGGTTTTTT  100

seq1  TTCCTTTTTTTTTTTTTTTTTTTAAGCAGTGACAAGGCTCCCCTCTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTTTTTTTTTTTTTTAAGCAGTGACAAGGCTCCCCTCTGTAG  150

seq1  CCCTGGCAGGCCTAGAACTGCCTAGAACCTGCTTTGACGGTTAGGTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCAGGCCTAGAACTGCCTAGAACCTGCTTTGACGGTTAGGTTGGC  200

seq1  TTCAAAGTCACAGAGATGTGGCTGCTTCTGCTTCTTAAGTGGGGTAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTCACAGAGATGTGGCTGCTTCTGCTTCTTAAGTGGGGTAAAGA  250

seq1  CACTCACCCCTAGGCTTGGCACTCAACTTCTATCCCAGTTCCTCCCTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACCCCTAGGCTTGGCACTCAACTTCTATCCCAGTTCCTCCCTAGG  300

seq1  GCCACGTCCTGGTATTCAGAAAGGAAAACAAAACAAAACAAAACAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGTCCTGGTATTCAGAAAGGAAAACAAAACAAAACAAAACAAAACT  350

seq1  ATGCTTCTCAGGAAATGAGAGTCTAGGGGCTGGAGAGATGGTTCCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCTCAGGAAATGAGAGTCTAGGGGCTGGAGAGATGGTTCCTGGAG  400

seq1  AGATGGCTTGGCAGTTAAGAGCACTGGCTGTGTCAAACACCGATGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTTGGCAGTTAAGAGCACTGGCTGTGTCAAACACCGATGCACAG  450

seq1  AAAATAAAGTAAAAATAAATAAATCATTTAAAAAAAATGAGAGTCTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGTAAAAATAAATAAATCATTTAAAAAAAATGAGAGTCTGTCC  500

seq1  CAGGATCCAGTTCTTCTTAAGAGAGGAGCTACGGGCTGGTGAAAGGTCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCCAGTTCTTCTTAAGAGAGGAGCTACGGGCTGGTGAAAGGTCCG  550

seq1  GAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAGCAAG  600

seq1  ATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA  650

seq1  TATAATAAATAAATAAATCTTTAAAAAAAAAAAGAGAGGAGCTACAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAATAAATAAATCTTTAAAAAAAAAAAGAGAGGAGCTACAATGT  700

seq1  CTCATACCCATGAAGACAGAGTTAGCAGTGGGGTTGGGCACTCTGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACCCATGAAGACAGAGTTAGCAGTGGGGTTGGGCACTCTGGAAGA  750

seq1  ACAGAATTGGCCCGAGACAGAAGTAACACTTAGTTTTTGCTATTATGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTGGCCCGAGACAGAAGTAACACTTAGTTTTTGCTATTATGCTT  800

seq1  ATGGGAGTTTTACAGTAAGGTTGTACAGTTTAGAATCAACAGTTTTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTTTTACAGTAAGGTTGTACAGTTTAGAATCAACAGTTTTCAAA  850

seq1  ACATCCTTTCCA-TTTTTTTTTTCTAGATCTCAGCAAACCAGACATGATT  899
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTTCCATTTTTTTTTTTCTAGATCTCAGCAAACCAGACATGATT  900

seq1  AAG-ATGCC-CATTTAAAAT-CTAAGGATGGGGACA--GGAGGGG--TGG  942
      ||| ||||| |||||||||| |||||||||||||||  |||||||  |||
seq2  AAGAATGCCTCATTTAAAATCCTAAGGATGGGGACAAGGGAGGGGGTTGG  950

seq1  CTC-GGTAGTTAAG-AGCATG-ACCTGATC-TTCCAAG-CACTACATTCA  987
      ||| |||||||||| |||||| |||||||| ||||||| |||||||||||
seq2  CTCGGGTAGTTAAGAAGCATGAACCTGATCTTTCCAAGCCACTACATTCA  1000

seq1  GTGCCCAGAACAG-TACC-CACATT-ATGTGGCTCATAATCGTTTGTAAT  1034
      ||||||||||||| |||| |||||| ||||||||||  |||| |||| ||
seq2  GTGCCCAGAACAGTTACCTCACATTAATGTGGCTCAATATCG-TTGT-AT  1048

seq1  TCTGG-CTCCAGGGG-ATCAGA  1054
      ||||| ||||||||| ||||||
seq2  TCTGGCCTCCAGGGGAATCAGA  1070