BAC Information

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BAC

Clone NameB6Ng01-341O01
Chromosome19 (Build37)
Map Location 32,623,625 - 32,624,630
singlet/doubletsinglet
Overlap genenone
Upstream genePrkg1, 1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1
Downstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341O01.bB6Ng01-341O01.g
ACCGA125136GA125137
length1,2111,011
definitionB6Ng01-341O01.b B6Ng01-341O01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
acttgccgagtcggtccgtaaatatggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
agtttcctccacggctattagggcctggaaggcgctctctcgagcaggtg
aaaccactgggcagttaacaaagataatccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
gtcagagcaagctgcgcctctgatagaacagctaatctatgagcaagcca
caaaggagtgccgagcggccatagccccaagaaagaacaaaggcttacag
actggctcaggtctgtcgagagcttggggacctctcaccaatgcaggctt
agcggccgccatcctccaatctcagaacgctcatggagcagaaatgatca
gaggacatgttttatggcggaagcctgggcattttagaaagatgcagagc
tccagaataaacaggaggacctctccactcttggctcttagtgtggcaag
ggttatcatagaagctggaccagtgttcgcgcctctgtgaaggaattaag
gcagaatctttccccacctgatagtcaatcactgagtgtggccaaaaaac
cgggtcattcg
gaattcataatcaatctttttctcttcgatctctgcaaatgctggcctgg
aaggccagtgtcccagtaaggagattcaaggagtccttaaagtaatacaa
tcaggtggaggtaaaagccaggagacaacagaaagcttcaagttaaaaag
gatgctacgacactagaaaattaatagatgaaattagtagcagctcccac
acggttggaggctggataattaactggccagtaaaaaattagctcctaga
atacagctggaagggaatgaaaatacaaacacaagcatacccatagaggc
atcacatcaaatcccatgtgagagagaaagctatgggaaggaaaaggcat
actgaggagcaagaagaatgcaattggcaaccacactggaggccaaacat
caatgtgcttaaagaagggacatttgtatctaggactctatacccagtca
tttggtcatctcactgttaagcataaaagatattttcagctgcacaaata
catagaacagttagtatccaaaaattctctctgagtctctccacccagca
gctactggaaacagatgtagagagccacagccaaacattagacgaagttc
agcaactcttgtggaagaatcgggcgaaggattgaggaacccagagggga
taggaactccacaagaagaccgacaaagtcaactacctagattgttgggg
tatcctagagactgaatcaccaaccaaagaacaagcctgggctggaccta
gggcttcacccccaccccataatgtagcagatatgcgggtgtgtcttcca
tgtgcgtcctccatggagcaggggttgtccctgactctgttgcctgtctg
tggatcccgttcccctaactgagccacctttgtctagcctcagtgggaaa
gggatgtgcctcatcctgcagtgacttgtgccaggggtgggtgataccca
gggtactcagaggagaaggggctggagtgggggggcaggagctaatgttt
ggagagggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32623625_32624630
seq2: B6Ng01-341O01.g_65_1075 (reverse)

seq1  CCCCCCTCT-CAAACA-TAGCTCCTG-CCCCCCACTCCAGCCCCTTCTCC  47
      ||||||||| |||||| ||||||||| |||||||||||||||||||||||
seq2  CCCCCCTCTCCAAACATTAGCTCCTGCCCCCCCACTCCAGCCCCTTCTCC  50

seq1  TCTGAGTACCCTGGGTATCACCCACCCCTGGCACAAGTCACTGCAGGATG  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTACCCTGGGTATCACCCACCCCTGGCACAAGTCACTGCAGGATG  100

seq1  AGGCACAT-CCTTTCCCACTGAGGCTAGAC-AAGGTGGCTCAGTTAGGGG  145
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AGGCACATCCCTTTCCCACTGAGGCTAGACAAAGGTGGCTCAGTTAGGGG  150

seq1  AACGGGATCCACAGACAGGCAACAGAGTCAGGGACAACCCCTGCTCCATG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGATCCACAGACAGGCAACAGAGTCAGGGACAACCCCTGCTCCATG  200

seq1  GAGGACGCACATGGAAGACACACCCGCATATCTGCTACATTATGGGGTGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACGCACATGGAAGACACACCCGCATATCTGCTACATTATGGGGTGG  250

seq1  GGGTGAAGCCCTAGGTCCAGCCCAGGCTTGTTCTTTGGTTGGTGATTCAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAGCCCTAGGTCCAGCCCAGGCTTGTTCTTTGGTTGGTGATTCAG  300

seq1  TCTCTAGGATACCCCAACAATCTAGGTAGTTGACTTTGTCGGTCTTCTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGATACCCCAACAATCTAGGTAGTTGACTTTGTCGGTCTTCTTG  350

seq1  TGGAGTTCCTATCCCCTCTGGGTTCCTCAATCCTTCGCCCGATTCTTCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCCTATCCCCTCTGGGTTCCTCAATCCTTCGCCCGATTCTTCCA  400

seq1  CAAGAGTTGCTGAACTTCGTCTAATGTTTGGCTGTGGCTCTCTACATCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTGCTGAACTTCGTCTAATGTTTGGCTGTGGCTCTCTACATCTG  450

seq1  TTTCCAGTAGCTGCTGGGTGGAGAGACTCAGAGAGAATTTTTGGATACTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTAGCTGCTGGGTGGAGAGACTCAGAGAGAATTTTTGGATACTA  500

seq1  ACTGTTCTATGTATTTGTGCAGCTGAAAATATCTTTTATGCTTAACAGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTATGTATTTGTGCAGCTGAAAATATCTTTTATGCTTAACAGTG  550

seq1  AGATGACCAAATGACTGGGTATAGAGTCCTAGATACAAATGTCCCTTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACCAAATGACTGGGTATAGAGTCCTAGATACAAATGTCCCTTCTT  600

seq1  TAAGCACATTGATGTTTGGCCTCCAGTGTGGTTGCCAATTGCATTCTTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACATTGATGTTTGGCCTCCAGTGTGGTTGCCAATTGCATTCTTCT  650

seq1  TGCTCCTCAGTATGCCTTTTCCTTCCCATAGCTTTCTCTCTCACATGGGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTCAGTATGCCTTTTCCTTCCCATAGCTTTCTCTCTCACATGGGA  700

seq1  TTTGATGTGATGCCTCTATGGGTATGCTTGTGTTTGTATTTTCATTCCCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTGATGCCTCTATGGGTATGCTTGTGTTTGTATTTTCATTCCCT  750

seq1  TCCAGCTGTATTCTAGGAGCTAATTTTTTACTGGCCAGTTAATTATCCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGTATTCTAGGAGCTAATTTTTTACTGGCCAGTTAATTATCCAG  800

seq1  CCTCCAACCGTGTGGGAGCTGCTACTAATTTCATCTATTAATTTTCTAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAACCGTGTGGGAGCTGCTACTAATTTCATCTATTAATTTTCTAGT  850

seq1  GTCGTAGCATCCTTTTTAACTTGAAGCTTTCTGTTGTCTCCTGGCTTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTAGCATCCTTTTTAACTTGAAGCTTTCTGTTGTCTCCTGGCTTTTA  900

seq1  CCTCCACCTGATTGTATTACTTTAAGGACTCCTTGAATCTCCTTACTGGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCTGATTGTATTACTTTAAGGACTCCTTGAATCTCCTTACTGGG  950

seq1  ACACTGGCCTTCCAGGCCAGCATTTGCAGAGATCGAAGAGAAAAAGATTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCCTTCCAGGCCAGCATTTGCAGAGATCGAAGAGAAAAAGATTG  1000

seq1  ATTATGAATTC  1006
      |||||||||||
seq2  ATTATGAATTC  1011