BAC Information

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BAC

Clone NameB6Ng01-344E12
Chromosome19 (Build37)
Map Location 33,142,346 - 33,143,563
singlet/doubletsinglet
Overlap genenone
Upstream geneAsah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344E12.bB6Ng01-344E12.g
ACCGA126814GA126815
length1,2531,206
definitionB6Ng01-344E12.b B6Ng01-344E12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttagtattgtttgcaaggctggcctactgccaatgaactgcc
tcttagttctattaatctaaatgtgtcttggtctcgtcctcaccttgaaa
gatagttttactggacatagctttcttagttggtatgtttttattatttt
tatttcaccgttttaagtattttaactattctgttcccacagcttctgag
gggaagccggtgaggaactttgagcataagccacttttcctttggtccac
caagattctctttatctttagctcttggtagatagagtacagtgtgtcta
cacgtgaacctctgcatattgatttcacaaactgccagttttcactacat
ttagaaagtttctgctattacttcatccattctccctgctcccctagctc
tcctatccttccgcgacttcctttcagacagactagactgtattccctga
ctcttgagacgctgttcagccccctttgttggctctttcttatcctcagc
atccgtgatgctaactggccttccctggagttgaccgcttgctctgtctg
tagaactacccggatctgctaccgaggcctttagtgaacttttcatgcct
cttacttcgcatctcagctctagactttatatttgacctttaaataattt
ctctatgcttatctctacttatggagaaactgctctcatattttcttcac
gtgtggttacatttagctctttgaacataagaacagagatttaagtctct
atctagtccctacctacatcctgactcctttagggtagttgtattgactg
ctttcatattgatggtgcagtgttttaatttttctgagaatagtcactaa
ttttgttgaacagtacaatttaaaataatatcacatgggagggagactct
tgacatttgagcatctcactgcagcacggctaatgttttctgttggtgac
gattacttcattctagctgtcactatcacaggtagccaccaatggtctct
gatacttaacttagcattcagctagtgattggaccaggagctcactaatg
acaaagtactttccaaggagttctatgtggcattggagacacctgaacac
tcaatgtcagagggaaatttgctttagcttcctttctgcttcctaagggc
cataagatagcaaaaacaagtttggaatctctgaggactctcacacaaca
gtagtggtgcctcaccctcgatatatacagtgtgccccagaccactactc
tgt
gaattcaggccctctagaaggacgtaggttgacacattctacagatatca
ctttttccaatagttgggtaaaaacattaaaatattttgtttgtttcatg
actttaaactaaaaaactagatagaaatctccctccatctcaaaacaaaa
tcttaggttcccagtgatcagaaacaatcttctccaaggccgttgtcaga
tatatagaaaaaccaagaaacgtttggttcagagcaggggcccttgagtg
cttgttcctggttagcaggataaactacgggctatttagcaaagtcagtc
ccagctccaaagagaatcttgagttgtgaagactttctcagagtcgaaca
ctcacagagcaagcaagaatattttgcagctcgtctaaactcagagaagt
aatttagtctaacacgagaaaaactcttgctgtcttcaaataaaaggaag
aaaagaaagaggagagagagagagagagactaagcaggagagatataaag
agatataaaggctctccactttctggtttccagctgtgtgattagtgact
cagagctgtgctctggtgctgagtgacgggatctggaaatgtgccctgcc
cagccatggcaactcagtttcagcacacactaaaggcaggcagtcaatgt
taacccaagcaaccaacccccacgtctgtcaaaatttaagctaagtatgg
catatgggattagagagggatcacagaacctcagacgtttccaagaaaaa
tgaataatataaggttaggccctagatcgtctgtatcttattaatccccc
ctttccacaacggtgggcgggtggcttgggctggggcccccgcagatggg
aagcacactttgctggggtttagttctattctccaggctcctcttaggca
cagaaatattcttttctggcatgagcagggatttagagcttcggtgtcaa
tttgctcttttgatggcttgaacagctgggttgagcccttgacgagttgc
aaggagcaatagaaacctgctcttgcatgattctgtggggcttagcttcc
cggtgctaggtctttagtttgcttcttcggcagagccacccagctgactt
ctggctctgttctcctgtttccaccgacttgagcatggtggacagaatgc
aactcctagtcaatggaattgagatctcgacttcggtataggaaacagct
ctgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33142346_33143563
seq2: B6Ng01-344E12.g_65_1270

seq1  GAATTCAGGCCCTCTAGAAGGACGTAGGTTGACACATTCTACAGATATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCCTCTAGAAGGACGTAGGTTGACACATTCTACAGATATCA  50

seq1  CTTTTTCCAATAGTTGGGTAAAAACATTAAAATATTTTGTTTGTTTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCAATAGTTGGGTAAAAACATTAAAATATTTTGTTTGTTTCATG  100

seq1  ACTTTAAACTAAAAAACTAGATAGAAATCTCCCTCCATCTCAAAACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAACTAAAAAACTAGATAGAAATCTCCCTCCATCTCAAAACAAAA  150

seq1  TCTTAGGTTCCCAGTGATCAGAAACAATCTTCTCCAAGGCCGTTGTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTTCCCAGTGATCAGAAACAATCTTCTCCAAGGCCGTTGTCAGA  200

seq1  TATATAGAAAAACCAAGAAACGTTTGGTTCAGAGCAGGGGCCCTTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGAAAAACCAAGAAACGTTTGGTTCAGAGCAGGGGCCCTTGAGTG  250

seq1  CTTGTTCCTGGTTAGCAGGATAAACTACGGGCTATTTAGCAAAGTCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCTGGTTAGCAGGATAAACTACGGGCTATTTAGCAAAGTCAGTC  300

seq1  CCAGCTCCAAAGAGAATCTTGAGTTGTGAAGACTTTCTCAGAGTCGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCAAAGAGAATCTTGAGTTGTGAAGACTTTCTCAGAGTCGAACA  350

seq1  CTCACAGAGCAAGCAAGAATATTTTGCAGCTCGTCTAAACTCAGAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGCAAGCAAGAATATTTTGCAGCTCGTCTAAACTCAGAGAAGT  400

seq1  AATTTAGTCTAACACGAGAAAAACTCTTGCTGTCTTCAAATAAAAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTCTAACACGAGAAAAACTCTTGCTGTCTTCAAATAAAAGGAAG  450

seq1  AAAAGAAAGAGGAGAGAGAGAGAGAGAGACTAAGCAGGAGAGATATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAGGAGAGAGAGAGAGAGAGACTAAGCAGGAGAGATATAAAG  500

seq1  AGATATAAAGGCTCTCCACTTTCTGGTTTCCAGCTGTGTGATTAGTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAGGCTCTCCACTTTCTGGTTTCCAGCTGTGTGATTAGTGACT  550

seq1  CAGAGCTGTGCTCTGGTGCTGAGTGACGGGATCTGGAAATGTGCCCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGTGCTCTGGTGCTGAGTGACGGGATCTGGAAATGTGCCCTGCC  600

seq1  CAGCCATGGCAACTCAGTTTCAGCACACACTAAAGGCAGGCAGTCAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGGCAACTCAGTTTCAGCACACACTAAAGGCAGGCAGTCAATGT  650

seq1  TAACCCAAGCAACCAACCCCCACGTCTGTCAAAATTTAAGCTAAGTATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCAAGCAACCAACCCCCACGTCTGTCAAAATTTAAGCTAAGTATGG  700

seq1  CATATGGGATTAGAGAGGGATCACAGAACCTCAGACGTTTCCAAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGATTAGAGAGGGATCACAGAACCTCAGACGTTTCCAAGAAAAA  750

seq1  TGAATAATATAAGGTTAGGCCCTAGATCGTCTGTATCTTATTAATCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATATAAGGTTAGGCCCTAGATCGTCTGTATCTTATTAATCCCCC  800

seq1  CTTTCCACAACGGTGGGCGGGTGGCTTGGGCTGGGGCCCCCGCAGATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACAACGGTGGGCGGGTGGCTTGGGCTGGGGCCCCCGCAGATGGG  850

seq1  AAGCACACTTTGCTGGGGTTTAGTTCTATTCTCCAGGCTCCTCTTAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACTTTGCTGGGGTTTAGTTCTATTCTCCAGGCTCCTCTTAGGCA  900

seq1  CCAGAAATATTCCTTTTCTGGCATGAGCAGGGATTTAGAGCTTCGGTGTC  950
       |||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  -CAGAAATATT-CTTTTCTGGCATGAGCAGGGATTTAGAGCTTCGGTGT-  947

seq1  CAATTTGCTCTTTTGATGGCTTGAACAGCT-GGTTGAGCCCTTGACGAGT  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAATTTGCTCTTTTGATGGCTTGAACAGCTGGGTTGAGCCCTTGACGAGT  997

seq1  TGCAAGGAGCAATAGAAACCTGCTCTTGCATGGATTCTGTGGGGCTTAGC  1049
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCAAGGAGCAATAGAAACCTGCTCTTGCAT-GATTCTGTGGGGCTTAGC  1046

seq1  TCCCCGGTGCTAGGTCTTTAGTTTTGCTTCTCCGGCAGAGCACACCCAGC  1099
      | ||||||||||||||||||| ||||||||| ||||||||| ||||||||
seq2  TTCCCGGTGCTAGGTCTTTAG-TTTGCTTCTTCGGCAGAGC-CACCCAGC  1094

seq1  TGACTTCTGCCTCTGTTCTCCTGTTTTCAACCGACCTGAGCATGGTGGCC  1149
      ||||||||| ||||||||||||| |||| |||||| |||||||||||| |
seq2  TGACTTCTGGCTCTGTTCTCCTG-TTTCCACCGACTTGAGCATGGTGGAC  1143

seq1  AG-ATGCAGCTTCTCTAGTCCCCATTGAAATTGATGATCTCGGTCTCCGG  1198
      || ||||| ||   |||||   || || |||||| |||||| | || |||
seq2  AGAATGCAACT--CCTAGT---CAATGGAATTGA-GATCTC-GACTTCGG  1186

seq1  GATAAGAAACAGCTCTGTGG  1218
       ||| |||||||||||||||
seq2  TATAGGAAACAGCTCTGTGG  1206