BAC Information

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BAC

Clone NameB6Ng01-349P14
Chromosome19 (Build37)
Map Location 19,778,883 - 19,780,069
singlet/doubletsinglet
Overlap genenone
Upstream gene2410127L17Rik, D030056L22Rik, Trpm6, Rorb
Downstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349P14.bB6Ng01-349P14.g
ACCGA130794GA130795
length1,1921,181
definitionB6Ng01-349P14.b B6Ng01-349P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagaaaatacagcattgtgggaagacctatagcctacagtctt
tactcagtttttacagcaatgaaaccaagcactactgaaatttgtctact
gagtagcatcttattattcttttgtcacttgtggttgaagcagctgcagt
gatctgttgatgctgtacctgtgtgaaacatttttttttcacagtgattg
aaaattactagggctgtactggagaagctattcatgatccttagacattt
tcctggctaaagtcttttcaccgcacatttcaagactgagcagtgaagag
agcaaaccctatcctcctcaaatatgtcttctgggggaagtgcaggggaa
aatgtccacaaattactccatggtctctttttcaacttcaattccaatgg
agtttgaattgaatcaaaatctttattcttatattatctcagaaagatta
tattactacttctataatatattcatttgttctactcaaattaggaagtt
atgtaatctataatcttgaagaataaaccttagaagttggatataaatgg
gcagagagaatgttggaattttctgcttatatccatccatgatctttttg
cttatgtaaaagaaaatataccttctagttttcctttgctatggctaaga
ttgtcattggacatgatcataggctttggttcttagtaaattagcatacc
tagtctgctgaaaaggtaatttcataaagaaagatgaaagattcaacttc
atctttaaagatatttaatagaaccctctctctttctctcaatttaatca
tgtcttctactttttcctccccagcttaagaatgtgttctaaacttgtac
atgtcttcacaagactcatgagactgaacaaaacatgggcataggtagta
acataacctgctaatattaatagaaatacaatgtgcaaattgactagttc
ccatggacaagtagtgtcatcaattttcatagatagcatttgtaaaagaa
gaaaaacataggtgtccactgctcattatcaaggcttaaattaggagaat
atgaattaggatttggggcctttaaccattgaatcattcacaatactgta
ttcctccagaaggctgcagccttatgccttttgtcatctgttgttaagga
ctctggatgtgatcaatataattccttgccaatggcctaaga
gaattctctcctgaggaatactgaatggctgagaagcacctgaaaaaata
tgcagcatccttaatcatcggggaaatgcaaatcaaaacagccctgagat
tccatctcccaacagtcagaatagctaagatcaaaaattcaggtgacagc
agatgctggagaggatatggagaaagaggaacactcctccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattagacatagtactactggaggatcctgcaatacctctcctgggc
ttatatccagaagatgttccaacaggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gctcctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggattgacctggagggcatcatctgatttggtaacccaataacaaaag
aactcacatggtatgtactcactgataagtcgatatcagcccagaaactt
tagaatacccaagataaaagacagaaaacatatgaaactcaagaagaatg
aagaccaaagtgtggacactttgcctcttcttagaattgggaacaaaaca
cccatgaaggagttacagagacaaagtttggagctgagacaaaagaatgg
accatctagagactaccatatccagggatccatcccataatcagctgcaa
acgcagacaccattgcatacactagcaagattttgctgaaaagaccctga
tatagctgtctcttgtgagactatgctggggcctagcaaccacagaagtg
gatgctcacagtcagctatttggatggatcacagggcccccaatgggagg
agctagtagaaagtatcccaaggagctaatgtgatcttgcaccctattag
ggtggaacacataatgaactaaccagtacacccatggagctcatgttctc
ttagctgcattatgtatcagaatgatgggcctagctggcctatcagtggt
aaagagagggtacatgggtcggtgcaactctatatggtaactcacgaatc
acagggggaaatgcctggtggctcaatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_19778883_19780069
seq2: B6Ng01-349P14.b_48_1239

seq1  GAATTCTGAGAAAATACAGCATTGTGGGAAGACCTATAGCCTACAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAAAATACAGCATTGTGGGAAGACCTATAGCCTACAGTCTT  50

seq1  TACTCAGTTTTTACAGCAATGAAACCAAGCACTACTGAAATTTGTCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTTTTACAGCAATGAAACCAAGCACTACTGAAATTTGTCTACT  100

seq1  GAGTAGCATCTTATTATTCTTTTGTCACTTGTGGTTGAAGCAGCTGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCATCTTATTATTCTTTTGTCACTTGTGGTTGAAGCAGCTGCAGT  150

seq1  GATCTGTTGATGCTGTACCTGTGTGAAACATTTTTTTTTCACAGTGATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTTGATGCTGTACCTGTGTGAAACATTTTTTTTTCACAGTGATTG  200

seq1  AAAATTACTAGGGCTGTACTGGAGAAGCTATTCATGATCCTTAGACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACTAGGGCTGTACTGGAGAAGCTATTCATGATCCTTAGACATTT  250

seq1  TCCTGGCTAAAGTCTTTTCACCGCACATTTCAAGACTGAGCAGTGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTAAAGTCTTTTCACCGCACATTTCAAGACTGAGCAGTGAAGAG  300

seq1  AGCAAACCCTATCCTCCTCAAATATGTCTTCTGGGGGAAGTGCAGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACCCTATCCTCCTCAAATATGTCTTCTGGGGGAAGTGCAGGGGAA  350

seq1  AATGTCCACAAATTACTCCATGGTCTCTTTTTCAACTTCAATTCCAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCACAAATTACTCCATGGTCTCTTTTTCAACTTCAATTCCAATGG  400

seq1  AGTTTGAATTGAATCAAAATCTTTATTCTTATATTATCTCAGAAAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAATTGAATCAAAATCTTTATTCTTATATTATCTCAGAAAGATTA  450

seq1  TATTACTACTTCTATAATATATTCATTTGTTCTACTCAAATTAGGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTACTTCTATAATATATTCATTTGTTCTACTCAAATTAGGAAGTT  500

seq1  ATGTAATCTATAATCTTGAAGAATAAACCTTAGAAGTTGGATATAAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCTATAATCTTGAAGAATAAACCTTAGAAGTTGGATATAAATGG  550

seq1  GCAGAGAGAATGTTGGAATTTTCTGCTTATATCCATCCATGATCTTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGAATGTTGGAATTTTCTGCTTATATCCATCCATGATCTTTTTG  600

seq1  CTTATGTAAAAGAAAATATACCTTCTAGTTTTCCTTTGCTATGGCTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTAAAAGAAAATATACCTTCTAGTTTTCCTTTGCTATGGCTAAGA  650

seq1  TTGTCATTGGACATGATCATAGGCTTTGGTTCTTAGTAAATTAGCATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGGACATGATCATAGGCTTTGGTTCTTAGTAAATTAGCATACC  700

seq1  TAGTCTGCTGAAAAGGTAATTTCATAAAGAAAGATGAAAGATTCAACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCTGAAAAGGTAATTTCATAAAGAAAGATGAAAGATTCAACTTC  750

seq1  ATCTTTAAAGATATTTAATAGAACCCTCTCTCTTTCTCTCAATTTAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAGATATTTAATAGAACCCTCTCTCTTTCTCTCAATTTAATCA  800

seq1  TGTCTTCTACTTTTTCCTCCCCAGCTTAAGAATGTGTTCTAAACTTGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTACTTTTTCCTCCCCAGCTTAAGAATGTGTTCTAAACTTGTAC  850

seq1  ATGTCTTCACAAGACTCATGAGACTGAACAAAACATGGGCATAGGTAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCACAAGACTCATGAGACTGAACAAAACATGGGCATAGGTAGTA  900

seq1  ACATAACCTGCTAATATTAATAGAAATACAATGTGCAAATTGACTAGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACCTGCTAATATTAATAGAAATACAATGTGCAAATTGACTAGTTC  950

seq1  CCATGGACAAGTAGTGTCATCAATTTTCATAGATAGCATTTGTAAAAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGACAAGTAGTGTCATCAATTTTCATAGATAGCATTTGTAAAAGAA  1000

seq1  GAAAAACATAGGTGTCCACTGCTCATTATCAAGGCTTAAAT--AGAG-AT  1047
      |||||||||||||||||||||||||||||||||||||||||   ||| ||
seq2  GAAAAACATAGGTGTCCACTGCTCATTATCAAGGCTTAAATTAGGAGAAT  1050

seq1  ATGAATTAGGATTT-GGGCCTTAAACCATTGATTCATTCACAATACTGTA  1096
      |||||||||||||| ||||||| ||||||||| |||||||||||||||||
seq2  ATGAATTAGGATTTGGGGCCTTTAACCATTGAATCATTCACAATACTGTA  1100

seq1  TTC--TCAGAA-GCTGCAGC--TATGCCTTTTTGTCATCTTGTTTGTTTA  1141
      |||   ||||| ||||||||  |||||| |||||||||||   ||||| |
seq2  TTCCTCCAGAAGGCTGCAGCCTTATGCC-TTTTGTCATCT--GTTGTTAA  1147

seq1  GTACTCTGGAATGTTGATCCAATAT-ATTCCTTTGCAATGG-CTAAGA  1187
      | ||||||| ||| |||| |||||| |||||||  |||||| ||||||
seq2  GGACTCTGG-ATG-TGAT-CAATATAATTCCTTGCCAATGGCCTAAGA  1192