Query= MSMg01no046_g05.b1 MSMg01no046_g05.b1 CHROMAT_FILE:
MSMg01no046_g05.b1 PHD_FILE: MSMg01no046_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:32 2005
(491 letters)
>mm_chr19_45747089_45747980
Length = 892
Score = 845 bits (437), Expect = 0.0
Identities = 473/485 (97%), Gaps = 1/485 (0%)
Strand = Plus / Plus
Query: 8 gaattctaagaggtgaacggacaatttttagcatatttgagtagactgaagaggtcgtat 67
||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 208 gaattctaagaggtgaaaggacaatttttagcatatttgagtaaattgaagaggtcgtat 267
Query: 68 gagggaggtggtaactttgcaatggagag-accaataggatgggaggtttgcaggatgtt 126
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 268 gagggaggtggtaactttgcaatggagaataccaataggatgggaggtttgcaggatgtt 327
Query: 127 aaccatccgaaggtagaccaggattaataggctgtggggatactataactgtagctagaa 186
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 328 aaccatccgaaggtagaccaggattaataagctgtggggatactataactgtagctagaa 387
Query: 187 cgggaaagaacagaatctgttccactgagtttaaataagcaataacacacaaggaaaaac 246
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 388 ggggaaagaacagaatctgttccactgagtttaaacaagaaataacacacaaggaaaaac 447
Query: 247 aactaagctagggggaattactgacctcaactaaaagttagcagaagtgactcatttgtg 306
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 448 aactaagctaggggaaattactgacctcaactaaaagttagcagaagtgattcatttgtg 507
Query: 307 gagcaaagcttccggatgctgcggcatcgcagcgaagcataaacacatgttcagataaaa 366
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 508 gagcaaagcttccggatgctgcggcatcgcagcgaagcataaacacgtgttcagataaaa 567
Query: 367 tccatcacactgagaaatcaatttcagttcctttaaagtgttggtacatacatcaccgcc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tccatcacactgagaaatcaatttcagttcctttaaagtgttggtacatacatcaccgcc 627
Query: 427 accaccttccaaacacagacgcacacatcccatcggaacccagcagcccctccagacagt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 accaccttccaaacacagacgcacacatcccatcggaacccagcagcccctccagacagt 687
Query: 487 tctca 491
|||||
Sbjct: 688 tctca 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 892
Length adjustment: 10
Effective length of query: 481
Effective length of database: 882
Effective search space: 424242
Effective search space used: 424242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_g05.g1 MSMg01no046_g05.g1 CHROMAT_FILE:
MSMg01no046_g05.g1 PHD_FILE: MSMg01no046_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:32 2005
(434 letters)
>mm_chr19_45855158_45855991
Length = 834
Score = 839 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Minus
Query: 1 actttgtgtcccaaactggcatttagtttgaggccatcttgccatacaagagtctttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 actttgtgtcccaaactggcatttagtttgaggccatcttgccatacaagagtctttatt 436
Query: 61 gtattgtctcagatcctaggatggggaaggataggaagagaactctgagggatacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtattgtctcagatcctaggatggggaaggataggaagagaactctgagggatacagaga 376
Query: 121 attcagaactagccatgttgttgacagtctgtaatctagggttgggaggccagccctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attcagaactagccatgttgttgacagtctgtaatctagggttgggaggccagccctggt 316
Query: 181 aacaaagtaagatcttgttttagcaacaagtgaaaggaggtagcttactgtgccttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aacaaagtaagatcttgttttagcaacaagtgaaaggaggtagcttactgtgccttctct 256
Query: 241 tggtagtactaaacgtgaatctctttaaagtatattaaaacagctctcattggatgtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tggtagtactaaacgtgaatctctttaaagtatattaaaacagctctcattggatgtggc 196
Query: 301 ttacacccttgatcttagtgctctgaaacagaggcagaatcagatagatattcgagggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttacacccttgatcttagtgctctgaaacagaggcagaatcagatagatattcgagggtt 136
Query: 361 tttgaggccagtgtggtctacagagcacgttccagtgctgccagggctgcacagagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttgaggccagtgtggtctacagagcacgttccagtgctgccagggctgcacagagagaa 76
Query: 421 acattgtctcaacg 434
||||||||||||||
Sbjct: 75 acattgtctcaacg 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
