CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCCATTTTATGGGGGGCAATACATCAATATCTTTATTCTTACTG
AACTGAGCCTAAACAGACCCTCAAGCATACATCCTACAACACATTTTAAA
CAGTGAATATTTATCTAATTTAATACCCAAGAAGGCTTTACCTGGCCTGT
GCTAACAACATTCTTGATTGTAGTTCAGAAAAGAAATTAAAGTAATCATA
CAAAAGTTAAAACCTGAAGGTGATGAAAATTATAAAAAAAAGAAAGACTG
ATGATGGCTTAGAGTTTCCACTGAGTTTATCCCTCTCATTAACACACCGT
AAGTCATACTGGTCATTTGTAAGATATTACACATATTTCATTTTAATTTA
ATTAGTACACACAACACAGTAATATAAGTTTATGTTTAGAAAGACTTGTT
CGTAAGAGAACAACAGAATCTGTCTATGTAAAATGGAGGATGAGGGGGGA
ATTAGTCAGAGAAAATCACCTCACAGCTTTCCTTAACAAGTTGGGAGATA
CCGTGAAATTTATTCCTTAATTAGTAGAAGGTTGATTAGCTCTCAATGCA
AACAATTACCACACTAATGTAAGGTTTTCCTGTAATGAATGGGAGTTTCT
ATGTAGCCTCTGGCTACCTACCTTGATTTGAACAGGATGTGAGACGCANA
GCAATTTCTTTTTTTTTTAATACTG

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTGATAATTACAATGTGGCACATG
TGTACAATGGAATTAAATTCAGCCATAAGTAAAAGTGAACATCAGAAGAA
AATTTATGGAAATGGAGAGGTAAACCAGCATTGTATTAAGTGAAGTGAAC
TACAGACATCGACTGTAATGATAGTCCTGGTTCCCTGTATTTGCTAAGCA
ACACATTATTTCATTTTTTAAATAAGTTTTATTTCTTTTTTTTCAATTTA
TTTTTTTAATTAGGTATTTTCCTCGTTTACATTTTCAATGCTATCCCAAA
AGTCCCCCATACCCACCCCCCCAATCCCCTACCCACTCACTCCCCCTTTT
TGGCCCTGGGGTTCCCCTGTACTGGAGCATATAAAGTTTGCAAGTCCAAT
GGGCCTCTCTTTGCAGTGAGGGCCAACTAGGCCATCTTTTGATACATATG
CAGCTAGAGACAAAAGCTCTGGGGGTACTGATTAGTTCATATTGTTGTTC
CACCTATAGGGTTGCAGTTCCCTTTAGTTCCTTGGGTAATTTCTCTAGGT
CCTTCATTGGGGGCCGTGTGATCCATCCAATAGCTGACTGTGATCATCCA
CTTCTGTGTTTGCTAGGCCCAGGCATAGTCTCACAAGAGACAGCTATAAC
TGGGTCCTTTCAGCAAAATCTTGCTA

Query= MSMg01no047_c17.b1 MSMg01no047_c17.b1 CHROMAT_FILE:
MSMg01no047_c17.b1 PHD_FILE: MSMg01no047_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:28 2005
         (608 letters)



>mm_chr19_51062520_51063528
          Length = 1009

 Score = 1081 bits (559), Expect = 0.0
 Identities = 595/607 (98%), Gaps = 3/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttccattttatggggggcaatacatcaatatctttattcttactgaactgagc 63
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctattttatggggggcaatacatcaatatctttattcttactgaactgagc 263

                                                                       
Query: 64  ctaaacagaccctcaagcatacatcctacaacacattttaaacagtgaatatttatctaa 123
           |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 264 ctaaacaggccctcaagcatacatcctacaacacattttaaacagtggatattaatctaa 323

                                                                       
Query: 124 tttaatacccaagaaggctttacctggcctgtgctaacaacattcttgattgtagttcag 183
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 tttaatacccaagaaggctttacctggcctgtgctaacaaaattcttgattgtagttcag 383

                                                                       
Query: 184 aaaagaaattaaagtaatcatacaaaagttaaaacctgaaggtgatgaaaattata-aaa 242
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 384 aaaagaaattaaagtaatcatacaaaagtgaaaacctgaaggtgatgaaaattatataaa 443

                                                                       
Query: 243 aaaagaaagactgatgatggcttagagtttccactgagtttatccctctcattaacacac 302
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 aaaagaaagactgatgatggcttagagtttccactgagtttattcctctcattaacacac 503

                                                                       
Query: 303 -cgtaagtcatactggtcatttgtaagatattacacatatttcattttaatttaattagt 361
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tc-taagtcatactggtcatttgtaagatattacacatatttcattttaatttaattagt 562

                                                                       
Query: 362 acacacaacacagtaatataagtttatgtttagaaagacttgttcgtaagagaacaacag 421
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 563 acacacaacacagtaatataagtttatgtttagaaagacttgtccataagagaacaacag 622

                                                                       
Query: 422 aatctgtctatgtaaaatggaggatgaggggggaattagtcagagaaaatcacctcacag 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatctgtctatgtaaaatggaggatgaggggggaattagtcagagaaaatcacctcacag 682

                                                                       
Query: 482 ctttccttaacaagttgggagataccgtgaaatttattccttaattagtagaaggttgat 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctttccttaacaagttgggagataccgtgaaatttattccttaattagtagaaggttgat 742

                                                                       
Query: 542 tagctctcaatgcaaacaattaccacactaatgtaaggttttcctgtaatgaatgggagt 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tagctctcaatgcaaacaattaccacactaatgtaaggttttcctgtaatgaatgggagt 802

                  
Query: 602 ttctatg 608
           |||||||
Sbjct: 803 ttctatg 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space:   597402
Effective search space used:   597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)