AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGGCAGAACAACCCAAGAGAAGCAAGCCCCTGCTGTAGCTCCTGCCTC
CAGGTTCCTGCCTTGAGTTCTTGCCCTGACTTGCCTTCTTCATAAGCTCT
AACTTGGAAGTGGAAATAAACCCTTCAGACTCTGAGTTGCTTTGGGTCAT
GGCATTCATCACAGTAATAGGAGGCAAACTAGAACAAGGACTCAGAACAG
TGCCTGCATCCCATGCTAAGAGAGGGAAGCATGGAATGAATACAGTCCAA
GTGAGCTATAAGCAAAGCATAGTTGTTTCTTTGCGAGTATGCACACTGAA
TTTGAGTGTTGTGACTCATCTCTAGTCTCTCCTAGATGAAACATACATCA
TGCACATGAAGTGTAGGTTGGCTTTGTACACACCTGACTCTTCCAGTAGA
CTGTGATGGGACAAACATAATGATCAGTTGGGGTTTCATACCTCGCAAGC
CCCAGTCAAGAACTTGTATGTCACCTAGCTACCATCCTTGTTTCTGCCAC
ATTGTGGTGAATGAGAAGAGGAATCCGGAAGATTTTTCTGTGTAAAAAGG
ATACAAGTCTTAAGCAATAGGAAAAGAAAGGAAATTAAATGAGGTACCAT
AGACTATGGATTGACAACACCACACTGTTGGAGAACTACTGGCAAAGGCA
AGAAT

CTGCTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCTCGAACTTCCAGAGACTGTCTTAATATTAAAGGAG
AGAGAGAGATAGAGATAGACAGACCGAGATATAGAGAGAGAGATATAGAG
AGATAGAGAGAGAGTCTTATCTTTTCCTCTCTCTCCTCTCTTTCCTCCCC
CTTTCTCTCCCTCCCCCCCTTCCCCCCCTCTCCCCTCTCTCTCTTCTCTC
TCCCCCCTCTCCCCCCTCCCCCCCTTCTCCTTCCTTTCCTCCTCCCTTTC
CCCCCTCCTCCTCTCTTCCCCCTCTTCCCCTCTTTTTCTTCCCCTCTTCT
TTTCCTCTCCCTCCTCTCTTCTTTTTCTCTCCCTCCCCCCTTCTCTTCCT
CCTCCTCCTATCCTTTCCTTCTCCCCCTCTTCCCCCCCTCCTCTCTTCTC
CCCCCTCCTCTCCTCTCCTTCCCCCCCTTCCTCCTTTTCCCCTCTTCTTT
TTCTCTTTTTCCTTCTCTTTCCTCTCCTCTCTCCTCTCTCTCCCCTCTTC
CTTTTCTTTTCCCTTCTTTTTTTTTCTCTCCCTTCTTCCCCCTTCTCCTC
CTTCCGTTCCTCCTTTCTTCTCTCCCCTTTTCCCTTCCCTCTTCCCTCTC
CTCCCCTCTCCTCCCCCTCCCCTCCCTCTCTCCCCCTCTCCCTCCCTCCC
CCCCTCTCTTCCTCCCCCTCCTCCTTCTCCCTTCTCCCTCCTCCCTTCCT
CTCTTCTTTCTCTTCCTTCCTTTCTTTTCCCCTCCC

Query= MSMg01no052_i06.b1 MSMg01no052_i06.b1 CHROMAT_FILE:
MSMg01no052_i06.b1 PHD_FILE: MSMg01no052_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:09 2005
         (631 letters)



>mm_chr19_17143739_17144769
          Length = 1031

 Score = 1197 bits (619), Expect = 0.0
 Identities = 625/627 (99%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattcaggcagaacaacccaagagaagcaagcccctgctgtagctcctgcctccaggtt 64
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gaattcaggcagaacaagccaagagaagcaagcccctgctgtagctcctgcctccaggtt 962

                                                                        
Query: 65   cctgccttgagttcttgccctgacttgccttcttcataagctctaacttggaagtggaaa 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  cctgccttgagttcttgccctgacttgccttcttcataagctctaacttggaagtggaaa 902

                                                                        
Query: 125  taaacccttcagactctgagttgctttgggtcatggcattcatcacagtaataggaggca 184
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 901  taaacccttcagactctgagttgctttgggtcatggcattcatcacaataataggaggca 842

                                                                        
Query: 185  aactagaacaaggactcagaacagtgcctgcatcccatgctaagagagggaagcatggaa 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  aactagaacaaggactcagaacagtgcctgcatcccatgctaagagagggaagcatggaa 782

                                                                        
Query: 245  tgaatacagtccaagtgagctataagcaaagcatagttgtttctttgcgagtatgcacac 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  tgaatacagtccaagtgagctataagcaaagcatagttgtttctttgcgagtatgcacac 722

                                                                        
Query: 305  tgaatttgagtgttgtgactcatctctagtctctcctagatgaaacatacatcatgcaca 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  tgaatttgagtgttgtgactcatctctagtctctcctagatgaaacatacatcatgcaca 662

                                                                        
Query: 365  tgaagtgtaggttggctttgtacacacctgactcttccagtagactgtgatgggacaaac 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tgaagtgtaggttggctttgtacacacctgactcttccagtagactgtgatgggacaaac 602

                                                                        
Query: 425  ataatgatcagttggggtttcatacctcgcaagccccagtcaagaacttgtatgtcacct 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  ataatgatcagttggggtttcatacctcgcaagccccagtcaagaacttgtatgtcacct 542

                                                                        
Query: 485  agctaccatccttgtttctgccacattgtggtgaatgagaagaggaatccggaagatttt 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  agctaccatccttgtttctgccacattgtggtgaatgagaagaggaatccggaagatttt 482

                                                                        
Query: 545  tctgtgtaaaaaggatacaagtcttaagcaataggaaaagaaaggaaattaaatgaggta 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  tctgtgtaaaaaggatacaagtcttaagcaataggaaaagaaaggaaattaaatgaggta 422

                                       
Query: 605  ccatagactatggattgacaacaccac 631
            |||||||||||||||||||||||||||
Sbjct: 421  ccatagactatggattgacaacaccac 395


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)