Query= MSMg01no064_i11.b1 MSMg01no064_i11.b1 CHROMAT_FILE:
MSMg01no064_i11.b1 PHD_FILE: MSMg01no064_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:31 2005
(227 letters)
>mm_chr19_25481458_25482085
Length = 628
Score = 379 bits (196), Expect = e-110
Identities = 220/228 (96%), Gaps = 1/228 (0%)
Strand = Plus / Minus
Query: 1 ctgacccagagttccagtgcctggaaatttcccctcatgctaacagaacgccccttcccc 60
|||||||||||||||||||||||||||||| ||||||||||||||| | |||||||
Sbjct: 428 ctgacccagagttccagtgcctggaaatttgagctcatgctaacagaatgtatcttcccc 369
Query: 61 tctctctccaactccacgggacagtgagttagctcaaaatatgcagccagacctgtttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tctctctccaactccacgggacagtgagttagctcaaaatatgcagccagacctgtttcc 309
Query: 121 agaagtgtctgaaattccaaaggaagcaaggagagaaggacggagcccaccatctcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agaagtgtctgaaattccaaaggaagcaaggagagaaggacggagcccaccatctcaggg 249
Query: 181 tggagggtgggggctgaatactcacggtgtggggatgggggg-tgggg 227
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 248 tggagggtgggggctgaatactcacggtgtggggatgggggggtgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 628
Length adjustment: 9
Effective length of query: 218
Effective length of database: 619
Effective search space: 134942
Effective search space used: 134942
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no064_i11.g1 MSMg01no064_i11.g1 CHROMAT_FILE:
MSMg01no064_i11.g1 PHD_FILE: MSMg01no064_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:31 2005
(155 letters)
>mm_chr19_25351636_25352190
Length = 555
Score = 269 bits (139), Expect = 6e-77
Identities = 151/155 (97%)
Strand = Plus / Plus
Query: 1 ggaacttcagcccctgtaggccaccaaagcgcggggctcttgttcagtctgcaaactgct 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ggaacttcagcccctgtaggccaccagagcgcggggctcttgttcagtctgcaaactgct 260
Query: 61 gctcttaaacacctaacagtacacacaaaagccccgcaccaatttttatcttgccccaaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcttaaacacccaacagtacacacaaaagccccgcaccaatttttatcttgccccaaa 320
Query: 121 tgacacttgtgcaaagatggaaaaaggccatgtgg 155
| ||||||||||||||||||| |||||||||||||
Sbjct: 321 taacacttgtgcaaagatggagaaaggccatgtgg 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
