Query= MSMg01no068_c17.b1 MSMg01no068_c17.b1 CHROMAT_FILE:
MSMg01no068_c17.b1 PHD_FILE: MSMg01no068_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:30 2005
(321 letters)
>mm_chr19_45741246_45741966
Length = 721
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttttgcatgggagagctgtaaagtgaacttctaaacattacaataaaggctgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattcttttgcatgggagagctgtaaagtgaacttctaaacattacaataaaggctgg 460
Query: 64 gggtgcaactcagagccccgagtttaatctctggtgcacacaaacaaaacccaattgaat 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 459 gggtgcaactcagagccccgagtttaatctctggtgcacacaaacaaaacccaattaaat 400
Query: 124 tattatacagttaggtataaatacctcttgagccttttcccttttgatgtgactttcaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tattatacagttaggtataaatacctcttgagccttttcccttttgatgtgactttcaat 340
Query: 184 gtaatacacgcttactgcagaaaacacagcacagtgcaaaggattggcaaacagaacaag 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 339 gtaatacacgcttactgcagaaaacacagcacagtgcaaaggcttggcaaacagaacaag 280
Query: 244 acacagttccatggtcattggtagcatttgtgatagacccttccagtctttttaagataa 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 279 acacagttccatggtcattggtagcatttgtgatagccccttccagtctttttaagataa 220
Query: 304 agtaatatgaaattta 319
||||||||||||||||
Sbjct: 219 agtaatatgaaattta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_c17.g1 MSMg01no068_c17.g1 CHROMAT_FILE:
MSMg01no068_c17.g1 PHD_FILE: MSMg01no068_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:30 2005
(289 letters)
>mm_chr19_45589957_45590645
Length = 689
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 aaggacatcctggtctacagagtgagttccaggacagcctg-actacacagaaacccccg 59
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 200 aaggacatcctggtctacagagtgagttccaggacagccaggactacacagaaacccccg 259
Query: 60 tctccaaaagaaaaagaaagcaggggtgacatgcattgattgattgattgattgattgat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctccaaaagaaaaagaaagcaggggtgacatgcattgattgattgattgattgattgat 319
Query: 120 tatcccattggtggtcaagaataggccgtgcgttgtactaagtaccatctgattcctggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatcccattggtggtcaagaataggccgtgcgttgtactaagtaccatctgattcctggg 379
Query: 180 tgtccttttcagagtgtgggatgtaaatgcaggtgagatgctaaacacattgattcacca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtccttttcagagtgtgggatgtaaatgcaggtgagatgctaaacacattgattcacca 439
Query: 240 ctgtgaagccgttctgcacctgcgcttcaataatggcatgatggtga 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgtgaagccgttctgcacctgcgcttcaataatggcatgatggtga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|