ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTACCAGACCTACAATGATGAGCTAATACCAATACTCCTGATACTATCC
CACAAAACAGAAACAGCAGGAACACTACCTAAATCATTCTATGAAGCTAC
AGTGACTCTGATACTTAAACCACACAAAGATCCAACAAAGAAAGAAAACT
TCAGACCAATTTCACTTATGAATATCAGTGCAAAGAATAATAAAATTCTC
ACAAACTGAACCCAAGACATCATTCACCACCATTAAGTAGGCTTCATCCA
ATGGATGAAAAGATGGTGCAATATACAAAAATTCATAAATGTAATAAACT
ATATAAACAAACTCAGAGGAAAAACCCACATGATCATCTCATTAGATGCT
GCAAAAGCTTTTTACAGAACACAATACCCCTTCATGTTAAACGTCTTGGA
AAGATCATGAATTCAAGGTCCATACCTAAACATAATAAAAGCAATATGCA
TCAAACTAGTAGCCAGTATTAAATTTGAGGAGAGATAGCTAAAACTAAGG
GCCATTTGAGCATAGTATGGAAATCAAATGCCATAGAATCTTTCTAAAAT
ATATACATATGTGAAGGGGATCTAAATGACATTGTCCAATAATGGTGAGG
GCAGAGCCTCTACTGGACATCTCTTGGCACCAATGAAGCTTCCA

AATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTAAGCCATGCTCTGAGCAGTTCTGAGGA
TCAATGCCACCCGGAAACACTGTTGTTAATTGCTGTATTTTGATCTTCAC
AAGAAATTTTAGATTTGGACTTTCTATTGTCAGTCATCATTTCCTTGTTG
GAGGAAAGCAATCTGCATAGAAGGGAAGAAATTTCTACAGTGAAGAGTCT
GTGTCCCACAGACAGGGTCTGGTTCAGCATCAGCCCATGATTTGTATATA
ATAAGGGTGGTCATGACTGGATAACATTTGCAACTCTGGGAGACGCTGTG
GTCCAGTTTCTACTTGGGGACCTCATTTCTGGAAAGTGCTGGGCTAAAGC
TAAGCCTAGGGACAGGCACAATCTAATGATGCCAAGAACAAAATTTCCTT
CGGGAGGGGGGTTTTTGAACATAGACCAAGGGCAGGGGGGAACACTGGGC
TATGGCCAAAGTCTGAAATGGCTGAATTACCCCCTTATAATTTCTGACAT
AAGTTAAGCAGTTTGTCATAATGGTCTCTTTCCTGCTCCATTTTCTGTGC
TGCAGTTGAATTCAAATGTGATGGAACAGGAGACCTGCTTGTTCTGTATG
GTTGGTGAGTGTTAGTTACTGACCATGCTAAGTCAGATCCTGT

Query= MSMg01no072_a09.g1 MSMg01no072_a09.g1 CHROMAT_FILE:
MSMg01no072_a09.g1 PHD_FILE: MSMg01no072_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:37 2005
         (572 letters)



>mm_chr19_54344431_54345402
          Length = 972

 Score =  977 bits (505), Expect = 0.0
 Identities = 557/581 (95%), Gaps = 15/581 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaagccatgctctgagcagttctgaggatcaatgccacccggaaacactgttgttaatt 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 198 ttaagccatgctctgagcagttctgaggatcaatgccacccagaaacactgttgttaatt 257

                                                                       
Query: 61  gctgtattttgatcttcacaagaaattttagatttggactttctattgtcagtcatcatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 258 gctgtattttgatcttcacaagaaattttagatttggactttctattgtcagtcat---t 314

                                                                       
Query: 121 tccttgttggaggaaagcaatctgcatagaagggaagaaatttctacagtgaagagtctg 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 315 tccttgttggaggaaagcaatctgcatagaagggaagaaatttctacattgaagagtctg 374

                                                                       
Query: 181 tgtcccacagacagggtctggttcagcatcagcccatgatttgtatataataagggtggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgtcccacagacagggtctggttcagcatcagcccatgatttgtatataataagggtggt 434

                                                                       
Query: 241 catgactggataacatttgcaactctgggagacgctgtggtccagtttctacttggggac 300
           |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 435 catgactggataacttttgcaactctggaagatgctgtggtccagtttctacttggggac 494

                                                                       
Query: 301 ctcatttctggaaagtgctgggctaaagctaagcctagggacaggcacaatctaatgatg 360
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 495 ctcatttctggaaagtgctgggctaaagctaagcctaggcacaggcacaatctaatgatg 554

                                                                       
Query: 361 ccaagaacaaaatttccttcgggaggggg-gtttttgaacatagaccaagggcagggg-- 417
           ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||  
Sbjct: 555 ccaagaacaaaatttcctttgggagggggagtttt-gaacatagaccaagggcgggggtg 613

                                                                       
Query: 418 ------ggaacactgggctatggccaaagtctgaaatggctgaattacccccttataatt 471
                 ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 614 gggggggg--cactgggctatggccaaagtctgaaatggttgaattacccccttataatt 671

                                                                       
Query: 472 tctgacataagttaagcagtttgtcataatggtctctttcctgctccattttctgtgctg 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tctgacataagttaagcagtttgtcataatggtctctttcctgctccattttctgtgctg 731

                                                    
Query: 532 cagttgaattcaaatgtgatggaacaggagacctgcttgtt 572
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cagttgaattcaaatgtgatggaacaggagacctgcttgtt 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)