Query= MSMg01no072_d05.b1 MSMg01no072_d05.b1 CHROMAT_FILE:
MSMg01no072_d05.b1 PHD_FILE: MSMg01no072_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:51 2005
(425 letters)
>mm_chr19_12024292_12025116
Length = 825
Score = 779 bits (403), Expect = 0.0
Identities = 418/423 (98%), Gaps = 2/423 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttacttccattctgttgatattgtgaaataaacaggtcacaagtggcttgtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttacttccattctgttgatattgtgaaataaacaggtcacaagtggcttgtt 263
Query: 64 ccttctgtgacttcctgtattcacatgtgagctacacaaatggagaaactgtcttgttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccttctgtgacttcctgtattcacatgtgagctacacaaatggagaaactgtcttgttca 323
Query: 124 ctccagcacagggctgacacataataggcaacaacaaaactttgatgaaaccaagattaa 183
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 ccccagcacagggctgacacataataggcaacaacaaaactttgataaaaccaagattaa 383
Query: 184 aggtggtattccaagaacccctttaaacagacataaaatgtgcccttggcttcctgaggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggtggtattccaagaacccctttaaacagacataaaatgtgcccttggcttcctgaggc 443
Query: 244 ctgtttctaaatacattgtcactcgttttatcagcaagccaggaacaatttgacaatgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtttctaaatacattgtcactcgttttatcagcaagccaggaacaatttgacaatgta 503
Query: 304 agtcagaccttatggttctggtacatcttccagtcctggtgggatacctgtagtaatatg 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 agtcagaccttatggttctggtacagcttccagtcctggtgggatacctgtagtaatatg 563
Query: 364 tactagaaagaaatca-catactataatggctttgaacgagggaggtttgtacgtggact 422
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tactagaaagaaatcagc-tactataatggctttgaacgagggaggtttgtacgtggact 622
Query: 423 gga 425
|||
Sbjct: 623 gga 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_d05.g1 MSMg01no072_d05.g1 CHROMAT_FILE:
MSMg01no072_d05.g1 PHD_FILE: MSMg01no072_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:51 2005
(484 letters)
>mm_chr19_12158611_12159494
Length = 884
Score = 685 bits (354), Expect = 0.0
Identities = 393/406 (96%)
Strand = Plus / Minus
Query: 1 tcataagaaatggattcaaagacaacaagaaaacaaattcaaattgctaacagaagatgc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcataaaaaatggattcaaagacaacaagaaaacaaattcaaattgctaacagaagatgc 547
Query: 61 cagtcaacaaagaattatatttccaatgaaaatgtagggaaccttatcagataaacaaaa 120
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 546 cagtcaacaaagaattatatttccaatgaaaatgtaggaaacattatcagataaacaaaa 487
Query: 121 gtggattatatatagcatctttccctatttaaaaaaaatgatgacacttctggataaaaa 180
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 486 gtagattatatatagcatctttccctattaaaaaaaaatgatgacacttctggataaaaa 427
Query: 181 tgtaggacattcagcaaaagataccggcaaaaagtaaaggctttttaatagaaccctggc 240
|||||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 426 tgtaggacattctgcaaaagataccagcaaaaagtaaaaactttctaatagaaccctggc 367
Query: 241 tgcttaggaggtaaggaaagatttaacacattgaaccttattaaattaaaaggcttttgt 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 366 tgcttaggaggtaaggaaagatttaacacattaaaccttattaaattaaaaggcttttgt 307
Query: 301 aaagcaacagaaatggtcagctgggtaaaaaggtagcttacgtgatgggaaagaaacttc 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaagcaacagaaatggtcaactgggtaaaaaggtagcttacgtgatgggaaagaaacttc 247
Query: 361 attagcttcatatctatcaaatcattaatatgtctagaattcacaa 406
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attagctacatatctatcaaatcattaatatgtctagaattcacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
