AAAATTTGCGGCGCTATACGACTCCTATAGTTCCCAAATACGCGGAATTC
TTTCTCTCTCTCCCCTAGCAGGAACTGTTCATGTGCATATTAAAAACCCT
CTTCTTCTTAGATCCCTACATTTTCCTCTCCACGCTTCAGCATACATTCT
TTCTTCTGACTTAGTTTCCAGTTCCCCACCACATCTGATCTATTGTGGAA
AACGATATGAGGTTCTTAAGGCCAGCCTTTAAATTGAGAATTTTAAAATT
TCACTTGATTGGTTCTAAGATTGTAACTCTCTGGCCAGTTTCGTCTCATT
CCCTTTGGCTCTCTCCATTCGTTTTCTCATGAGTTTTCCTTCCACAGTTT
ACAATCACTCCGTTTTAGTTCCTTCTATGGAGTAGCCATTGAGTGACGGC
TGAATATTAGTTACAGGATCAAGGTGGTGAGAGTGGACTTCCTGTCCCAT
CTCAGAGCAGCTGATAGAGAGCCGCAGAGACCACATCTGTTCAAACTGAC
TCAGAGCAGGGTTTGCAATAAGTGGAGAACGTTCCGTTTTGGTCTTACCC
TTCTCCTTGACAGCAGCTGGCAACTGTTCCCCAAAGACAGCCAGCAAGCA
GATCTTTCAGGCTTTGTTGAGGCACTTAAGTCTGACCTCATATATTTTTT
TTTTTAAGCCTATGAACAATGTAGAAATTAACAGGTATGGCT

TGAAGTGGTAGGCTCGGGGGCGCTGGCCTTCCTATCTTGCGAACNANAGA
AGGTTTGCAGCATGCAGACNCNNNGGNNGGAANGNGGAANCNGAGGNNCN
CCNCNCAACTGGCCCAGGCNAAGGANCNNNCCAGGGCNCAGGGCCCGGGA
AGACAGAANCNTGGCCACGGGCGNNCCAGGNANCNACAACGCNNNNAGAG
NCAANCNCCAAGCCACCCCACCAGCTTCNGCACCGGGCACGGGTCTTATG
TGGGCCCAGATGTCCGGTGTCAATTGCATTTTGGATTATATCTTCAGGAT
AGAGCGGAGTTTTTTTCTTTTTCGANGGCGAGANNCCCACAAAGCGGNNC
ATATTTGTTGCCCCCATCATCTTTCCAGGATTCTTCAGCCTTTCAGGGGA
AGAAGGCTCCTCTCCTGCAAAACATGTCAGGCTTAAATTTCTTTCAGAGT
TATCCCCTGAGCTTTCTTGTCGCTGGATAAACTCTTCATCAAATTCCACA
AGGCTGTCTTTACCAGCCTCTGATTAAAGAGAACTGGAGGAGTAATTGGA
CATGTTGATCCCCATCTCACCAAGCCCCTTAGGCCCTGGAGATAGGTTCC
CTTCTGACGAATCGCTTGTGAGGAAGTCCGCTTCTGGAGATTTTTTTTTT
TTATTTTAAAGAGAGCTGGCACTGCTCTGAAGCTATGC

Query= MSMg01no072_e22.b1 MSMg01no072_e22.b1 CHROMAT_FILE:
MSMg01no072_e22.b1 PHD_FILE: MSMg01no072_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:00 2005
         (587 letters)



>mm_chr19_17088381_17089367
          Length = 987

 Score = 1054 bits (545), Expect = 0.0
 Identities = 575/585 (98%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattctttctctctctcccctagcaggaactgttcatgtgcatattaaaaaccctcttc 62
           |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 203 gaattctttctctcccttccctagcaggaactgttcatgcgcatattaaaaaccctcttc 262

                                                                       
Query: 63  ttcttagatccctacattttcctctccacgcttcagcatacattctttcttctgacttag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcttagatccctacattttcctctccacgcttcagcatacattctttcttctgacttag 322

                                                                       
Query: 123 tttccagttccccaccacatctgatctattgtggaaaacgatatgaggttcttaaggcca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttccagttccccaccacatctgatctattgtggaaaacgatatgaggttcttaaggcca 382

                                                                       
Query: 183 gcctttaaattgagaattttaaaatttcacttgattggttctaagattgtaactctctgg 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcctttaaattgagaattttaaaatttcacttgattggttctaagattgtaactctctgg 442

                                                                       
Query: 243 ccagtttcgtctcattccctttggctctctccattcgttttctcatgagttttccttcca 302
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 ccagtttcgtctcattccctttggctctctccattcgtcttctcatgagttttccttcca 502

                                                                       
Query: 303 cagtttacaatcactccgttttagttccttctatggagtagccattgagtgacggctgaa 362
           ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 503 cagtttacaatcactccgttttagttccttctacggagtagccattgagtgatggctgaa 562

                                                                       
Query: 363 tattagttacaggatcaaggtggtgagagtggacttcctgtcccatctcagagcagctga 422
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 563 cattagttacaggatcaaggtggagagagtggacttcctgtcccatctcagagcagctga 622

                                                                       
Query: 423 tagagagccgcagagaccacatctgttcaaactgactcagagcagggtttgcaataagtg 482
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 tagagagccgcagagaccacatctgttcaaactgactcagagcagggttttcaataagtg 682

                                                                       
Query: 483 gagaacgttccgttttggtcttacccttctccttgacagcagctggcaactgttccccaa 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gagaacgttccgttttggtcttacccttctccttgacagcagctggcaactgttccccaa 742

                                                        
Query: 543 agacagccagcaagcagatctttcaggctttgttgaggcacttaa 587
           ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agatagccagcaagcagatctttcaggctttgttgaggcacttaa 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no072_e22.g1 MSMg01no072_e22.g1 CHROMAT_FILE:
MSMg01no072_e22.g1 PHD_FILE: MSMg01no072_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:00 2005
         (148 letters)



>mm_chr19_17193088_17193635
          Length = 548

 Score =  279 bits (144), Expect = 7e-80
 Identities = 147/148 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctttccaggattcttcagcctttcaggggaagaaggctcctctcctgcaaaacatgt 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 348 catctttccaggattcttcagcctttcaggggaagaaggctcctctcccgcaaaacatgt 289

                                                                       
Query: 61  caggcttaaatttctttcagagttatcccctgagctttcttgtcgctggataaactcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 caggcttaaatttctttcagagttatcccctgagctttcttgtcgctggataaactcttc 229

                                       
Query: 121 atcaaattccacaaggctgtctttacca 148
           ||||||||||||||||||||||||||||
Sbjct: 228 atcaaattccacaaggctgtctttacca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 548
Length adjustment: 8
Effective length of query: 140
Effective length of database: 540
Effective search space:    75600
Effective search space used:    75600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)