TTCTTAATTTAATANATACATTCCTAACCCNNNTCCCCCTNNNNNNCCTA
TCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACAGGATCCGCG
GAATTCCATACTCTGCTTTGCCGGGTGCATCTCTGAACTGTTAAAAATTC
CTTTCCTATGTTTGCTACAATTCCTAGCTCTCGCGGTTCTGGTCCCATTC
TTTATTTTAAAGGTTAGAACACTGACTTCTTAAGGTGTTTGTTCAAGGCC
ATACTTCAAACAGGTCATGTGTTATTCTTTTGATAAGAGTCACAAAAAAT
GTCACCTATTCCATATGCTTCCAAAACCTTACTGTAGAAGGCATGCCTAG
TACACTTGACCCTGGGTATGCTTTCATGATAGCATTAATTGGTAGAGAAT
GTTATAGATAACCTAATGTGACTTCTTAGGCTATGTCGGAAGATTATAAG
AACTCCCGCTGTGTTGTTTTGGAATTCTGGATTCTGGAACCCAGTGACTA
TACTGTCTGGAAGTCCACCCATCTGTGCAGCCATTTTTCTTACCGGCACA
GCAACTGAAAGCCCCATCACAGATACTTTGTTGATGCTATCTTTTTCCTA
GTAGATTGTTGCTCATTTGTCCAATACAATGTATTCCCCTGTCCTGATGG
ATAATGTCTCAGCGCCCACCAACAATAATAAGCTTATTTCGTCATTAACC
ACCCTTTCCGAACTCTATAACTTGTATCCCTGACCACCATATCATTCATT
GATCACTTCACCCATTTTTCCCGATCCGCCAAACAATGTATACTACCTGG
CCACCCCGCGCTT

CGATGAAGTGGGAGGCCTGGGGGCGGCTGGCCTTCCCAACTCGCNGAACN
ANAGAAGGATCTTTCCCCTACGCAGAGCAGANGGAGNNGGAGGNNAGCTG
AGAAGNAAACACGGGCGATTTGATCTCAGNANGAANAAANCACAGACCCA
AGAAAANTTTTTCCCCTAGAGACGCGTATTGGACCTTCTGTTGCTTCCTA
ATCCTGTGAGAAAAACAATTTAAGGAAGGAGAATTTTATCTTGGTTCGGG
ATTTCAGATTTTTCTGTATACTACGACAGGAGGGTGCCGAAAACAGAAGG
AGCTCATGCAGTGGGCAGCCCTTTTTTTTTTAGAACGCACCGCTGNCGCA
AAGCGCCCACCGTTTGTTTCCTCCCCCCTCCCTAGGCCTCCTAGCCTATG
CAATGATTCTGTCCACCCTCATCACAGATCGACACCCAGTCCCTCACCCA
TCCCTGCAAATGATCTCACAGACATGTCCATAGATGTCTGCTACTAATCT
CTTCGAGGTTTCCCCCCTCTTCATATCGGCCTTCCCGAATAACCGTCCCC
GTGGCGTTACCCAAAAGAACCGTAACTTTTTACTCATTCTTCTATCTTAT
CCGCAAGGAAATCCATTACCTTCCTTCCATCCCTGTCTCCCCCTTCTCAC
TCTGCCCTACTACCACCAACACCCCTAGTCCGGTGTTTTTTCCTATTCAC
CGTACCTCACCCCCCCCACCCCTCAACTGGCCACCCATGTGCTCCTTCCC
CCACACCCCCCCGCA

Query= MSMg01no091_l20.b1 MSMg01no091_l20.b1 CHROMAT_FILE:
MSMg01no091_l20.b1 PHD_FILE: MSMg01no091_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:21 2005
         (211 letters)



>mm_chr19_19033243_19033853
          Length = 611

 Score =  400 bits (207), Expect = e-116
 Identities = 210/211 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggttctggtcccattctttattttaaaggttagaacactgacttcttaaggtgtttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggttctggtcccattctttattttaaaggttagaacactgacttcttaaggtgtttgtt 260

                                                                       
Query: 61  caaggccatacttcaaacaggtcatgtgttattcttttgataagagtcacaaaaaatgtc 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggccatacttcaaacaggtcaggtgttattcttttgataagagtcacaaaaaatgtc 320

                                                                       
Query: 121 acctattccatatgcttccaaaaccttactgtagaaggcatgcctagtacacttgaccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctattccatatgcttccaaaaccttactgtagaaggcatgcctagtacacttgaccct 380

                                          
Query: 181 gggtatgctttcatgatagcattaattggta 211
           |||||||||||||||||||||||||||||||
Sbjct: 381 gggtatgctttcatgatagcattaattggta 411


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space:   121604
Effective search space used:   121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no091_l20.g1 MSMg01no091_l20.g1 CHROMAT_FILE:
MSMg01no091_l20.g1 PHD_FILE: MSMg01no091_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:21 2005
         (145 letters)



>mm_chr19_19192687_19193231
          Length = 545

 Score =  221 bits (114), Expect = 2e-62
 Identities = 137/145 (94%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagacccaagaaaantttttcccctagagacgcgtattggaccttctgttgcttcctaa 60
           ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 345 acagacccaagattattttttcccctagagacgtgtattggaccttctgttgcttcctaa 286

                                                                       
Query: 61  tcctgtgagaaaaacaatttaaggaaggagaattttatcttggttcgggatttcagattt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 285 tcctgtgagaaaaacaatttaaggaaggagaattttatcttggttcgggatttcagaggg 226

                                    
Query: 121 ttctgtatactacgacaggagggtg 145
           |||||||||||| ||||||||||||
Sbjct: 225 ttctgtatactaggacaggagggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space:    73569
Effective search space used:    73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)