BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-093D21.T7 (MSMg01no093_d21.b1) | MSMg01-093D21.TJ (MSMg01no093_d21.g1) |
ACC | AG310737 | AG310738 |
length | 1,253 | 1,370 |
length of high quality (start - end) | 179 (71 - 249) | 245 (70 - 314) |
definition | CHROMAT_FILE: MSMg01no093_d21.b1 PHD_FILE: MSMg01no093_d21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:36 2005 | CHROMAT_FILE: MSMg01no093_d21.g1 PHD_FILE: MSMg01no093_d21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:36 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | plural |
---|
sequence | TATTGCGCGCTATXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATGA
CATCCTTAGGCCCCTTAAGGAAGTTGAAAATATCATTTCGAGTGAGGTAA
CCCCTTCAGAACAGAACACACACCCCATATACTCACTGATAGGTGAATAT
TAGCTCAGATGCTTGGAATACCCAATGTACAATTCACAGAACAAATGAAG
CTCAAGGAATGAAGGCCAAAGTATGATTACTCTGGTTCTCCTTAGAAAGG
GGAACAGAATACCCATGGGAGGAGTTAGAGACAGAGTGTCTAGCAGAGAC
TGAAGTAAAGGCCATCCAGAGTCTGCTCCACCTTGGCATCCATCTCACAT
ACTGCCACCAAATCCAGACTTTACTGTGCATGCCAACACGTGTTTTTTTA
CAGCATCCTGATATATCTGTCTCCTGATAGTCTCTTCCCCCGCCTGACTT
ATACCCAGGTGCTATGTTCTTATTCTTTCATTCTACTTATCACATTCTCC
CTCTTTTCATATTTTCACTATTGTTCCTCATCTTTCTGATTCATTTTGCT
TTCTTTACTTCTTTATTTATTACCTTGACTTCTTCTTCTTTTCTCTCCCA
TTTCTCAGTTCCTTATTTCCTTCATTTCTTTATATTTTTCCTCTTCTTTA
TCTTACTTTCTTCTTGTTGCTTCTTTCTCTTCTATTTCCTTTTCTTGCTT
TCTTTTTCCTTTCTCTCTTCTCTTTTCTCTTTTTTCTCTTTTCTTTTTTC
TTTTTTCTCTTTTTTTTTTTCCTTTTATCTTATTTTTTTTATTTCTCTCT
TCTTTTCTTTTCTCTTCTTTTCTTTTTTTTTCTTTTTCCTCCTTTTTCTT
TTTTTTTTTTTTTTTTTTTCCCCTCTCTCTTTTCCTCTTTCTTTCTTATT
TATCCCCCCCTCTTTTTCTTCTTTTTTCTTTTTCTTTTCTTCCTTTTCCT
TTTTTTTCTTTTTCCCCCTCTTATTTTTCTCCTATCTCCTCTTTTTCTCA
TCTCTCTTATTTCTTACTTCTTTTCCTCTTTTCTTTCTTTCTTTCTTTTT
TCTTCTTTTTCTCTTTTCTTCTTTTATCTTTCCTTTTATTTTTTTCTTTT
TTTCCTCATTTTTTTTACTTCTTTCTCTCCCTTTGTACTTTTCTTATATT
CACTTCTACTCTCCTACTCTATTTCTTATACTCTTTATATCTTTCTTCTT
ATTTAATCTATCCATTATTCCTCTTTCTATGCTCTCCTTTTTTTCTCTTC
CCA
| TTTTAACATGGAGGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATAGATGGAAGTCACTATCTTTTACAAAGCA
CTTGGTAGCCTTTTGGAGAAGGTACCATCGTTTTGAAAAAGATGAGGGTG
ATACTGGGGAATATAAATCAGTAATTCACTTTTAGACAGAAGTAGTAGCT
TAGTATAGGCTTAAAGTAAAATGTCCCCTGCTCACATTCAAAAATATGGG
ACAAGTAGGTATTTTGAGACTAATAGTAAGAGTGTGTGTATTTGTGTGTG
TGTATAATTTATGCTCCTTTGTTTTTTCTTTTTTCCTCTCTTTTCTTTTT
TCTTATCTTTTTTTTTTTCCTCTTTATTTTTTCTNCTCTTCTTCCTTTTT
TTTTTTTCTTTTTTTTTAACTCACTCTTTTTCTTTCTTTTTTTTATTTTA
TTTCCTCCTTTTTTTTTTTCCCCCCCCCCCCTTTTTTTTTTTTTTCTTTT
CTTAAAAAAAAAAAGAGGGTGTTTTTTTCCTCTTTTTTCTTTTTTCTCTT
CCTTTTTTCTTTTCTTTCTTTTTCTTTTTCCTTTCTTCATCTTCTTCCTT
TTCTCTCTTCTTCTTTTCTATTATTCTCTTCTTTCTCTGTTTTTCTTTAT
CTTTCTTCTTTCTTTTTTTTCTTTTTTTTTCTTTTTCTCTTTTTTCACTT
TTCTTTCTTTCTCTTTTTTTTTTATCTCTTTTTTTTTTTTCCATCCTTCA
TTATTTTCTCTTTTTTCCCTTCTCTCTTTCTCTTCTTTCTTTTTTTCTTT
TTTCCTTTTTTTTTATTCCTTTATTTACTCTTCTTTCACTTTTTTTTCCT
TCTACTTTTTTTCTTTTTTTCTCTTTTTCTCTTCTTTTCTTTTCTTTCTT
TCCATTTCTTTTACCTTTTTTCTTTTTTTTTTTTTCTTCTTTTTCTTTCT
CTTCTCTCTCTTACTTTTTCTCTTTTTTATATCTCTTCTTCTTTCTCTCT
CTCTTTTTTTTTTATTTCTTCTCTCTCTCCTACTTTCATTTTTTTTTTTC
CTTCCCTATTTCTTTTCTTTTTCTTTATCTTTTCTCTTTCTTTTTCTTCT
TCTCTATTCTTTTTTCTTTTCTTCCTTTCTATCTTCTATCTCTTTCATCT
CTCCTTCTATTTTTATCTGCTTTTTTACTCTTTTTTTTTTCTTCTTTTTT
CTCTATTTCTTTTTTTATCTATTTCCCTAACTTCTTTCCCTTTTCTTCTT
TCTTCTTCTTTATTTTTCTTCTCTTTTCTTTCATACCTTTTCTCTACCTT
TTATTCTTTTCTTCCCCTCTCTCTTTCCTATCTTTTTCCTCCTCCCATTT
CACCTTCTTTTTCTTCCTTC
|
quality values | Open.Hide. 8 8 8 8 8 8 8 8 17 12 18 11 11 10 11 17 23 28 30 28 32 32 33 33 33 34 37 37 36 42 42 42 42 42 48 48 48 40 39 23 21 14 24 23 33 32 36 33 36 33
33 33 33 33 41 36 34 28 21 21 10 12 12 11 8 8 8 8 8 11 13 26 28 28 37 37 46 48 48 48 48 43 44 43 48 48 39 59 35 35 22 29 29 30 29 33 28 28 25 27
24 23 17 11 11 11 22 16 25 28 34 37 32 30 30 31 30 34 26 19 16 11 9 9 9 11 17 26 33 33 33 33 33 37 33 33 33 33 33 43 39 43 39 37 37 39 37 43 43 32
32 23 19 19 27 32 24 30 30 42 43 57 43 42 30 30 42 44 44 43 39 39 30 29 17 19 20 21 24 28 28 28 32 40 39 44 46 46 43 37 37 35 35 35 42 42 43 43 41 37
37 44 44 35 35 35 21 21 10 10 10 21 27 43 43 43 33 29 23 22 32 32 35 50 50 52 52 52 52 52 57 44 42 35 19 19 12 27 36 57 57 38 38 13 13 12 27 24 28 16
14 14 14 32 32 18 18 16 27 18 29 33 43 28 28 24 18 12 12 11 19 18 20 20 32 32 33 27 27 27 32 20 20 20 20 27 27 32 16 10 10 10 14 10 13 13 12 24 11 15
15 27 27 15 12 12 11 12 12 18 24 27 32 24 24 24 12 12 12 15 9 9 11 24 24 37 35 42 30 28 28 42 32 32 20 19 15 22 19 27 23 20 20 32 28 25 23 23 23 28
21 28 20 15 15 24 24 12 16 11 10 10 10 10 17 11 12 11 15 11 11 11 18 18 11 10 8 8 8 8 15 14 24 19 14 12 12 11 11 11 9 11 12 20 11 11 10 12 13 13
11 11 11 10 10 10 10 13 16 16 24 19 17 16 13 12 12 10 12 16 18 14 14 14 17 14 12 8 8 8 8 8 10 16 25 11 11 11 10 13 11 11 12 19 19 11 8 8 8 8
8 8 6 6 8 8 9 9 8 8 8 8 6 7 10 8 10 10 11 19 18 13 10 10 9 9 9 10 12 12 18 8 8 8 8 8 12 10 10 8 8 8 9 9 8 10 8 10 8 8
13 10 10 10 13 10 10 8 8 8 8 8 8 8 12 10 10 8 8 11 13 10 10 8 10 8 10 8 8 8 7 6 8 8 10 10 12 12 10 10 9 9 9 9 8 10 8 9 9 8
8 8 8 8 8 8 8 10 11 8 8 9 9 9 10 8 8 6 6 8 6 6 8 6 9 10 9 9 9 8 8 6 7 8 8 10 10 13 15 10 14 23 14 11 8 11 8 8 8 8
10 12 10 6 6 8 8 8 10 8 10 7 7 10 8 8 8 8 8 8 8 10 16 15 10 13 10 12 10 9 9 9 8 12 10 10 8 8 8 8 8 8 7 7 10 10 10 11 8 9
9 10 10 8 8 8 10 10 8 8 8 8 10 9 9 9 9 9 9 9 9 9 10 10 10 9 8 8 8 8 8 8 8 6 6 10 11 12 9 9 8 8 12 10 10 9 9 10 8 8
8 10 10 12 10 10 6 6 8 8 16 10 9 9 8 8 7 6 8 8 8 9 9 10 8 10 13 19 10 10 8 8 10 10 8 6 6 8 8 8 8 10 9 9 9 10 10 10 8 8
8 8 10 13 16 10 10 11 10 9 9 10 10 10 10 8 8 10 8 8 10 6 6 8 8 8 9 8 8 10 8 8 8 9 13 10 10 9 9 8 8 8 11 8 8 8 8 8 8 8
9 11 10 13 13 12 10 10 13 8 8 8 8 7 6 8 6 8 8 8 9 9 10 12 10 11 8 9 8 10 9 11 11 11 9 12 8 8 8 8 8 8 9 13 10 10 10 16 12 14
12 16 10 9 8 10 8 8 8 10 10 13 12 12 12 15 8 8 7 6 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 12 12 8 8 8 8 10 10 11 10
8 6 6 10 12 17 19 20 13 12 10 10 9 14 12 9 9 10 8 8 8 10 12 10 15 10 9 9 9 15 10 10 9 10 9 10 15 11 12 12 13 10 12 13 14 14 8 8 6 6
8 12 19 22 17 18 15 12 10 15 10 12 13 18 18 17 9 8 8 8 8 6 6 8 10 10 10 8 8 6 6 6 6 6 6 8 8 8 6 7 7 8 8 8 8 8 6 6 6 8
8 8 8 10 8 6 6 8 8 8 8 9 6 8 6 6 6 10 7 6 10 11 12 12 10 10 10 10 10 10 12 10 8 8 8 8 6 7 8 8 6 6 10 8 11 11 9 9 9 9
9 10 8 8 10 8 10 8 8 10 8 8 8 8 10 12 10 10 8 8 12 12 8 10 10 9 9 9 8 8 8 8 8 8 11 11 10 10 11 18 12 12 8 8 8 8 8 12 15 14
12 12 9 9 9 9 8 8 11 11 11 21 23 15 12 8 8 6 6 10 10 10 10 10 13 8 8 9 9 9 10 13 10 9 9 8 8 8 8 8 9 12 9 10 9 9 10 10 8 10
8 8 8 6 6 6 8 8 6 6 8 6 6 8 8 9 12 8 8 6 6 8 10 10 8 8 6 6 8 8 8 9 9 12 12 9 8 8 6 8 12 8 8 8 9 11 12 8 8 8
8 8 8 6 6 6 6 8 7 6 8 8 8 8 8 8 8 8 8 8 7 8 7 7 6 7 8 8 8 8 6 6 9 9 11 11 11 15 14 15 11 6 8 6 7 8 8 9 10 9
9 9 9 | Open.Hide. 7 7 6 6 7 6 6 6 6 6 6 6 8 8 8 8 8 8 8 9 11 15 11 8 9 8 11 13 28 29 29 30 33 33 33 37 37 36 36 36 36 50 36 36 50 50 50 50 53 53
53 57 57 57 53 57 68 68 68 68 57 59 46 43 43 43 46 48 50 54 50 53 53 68 68 68 68 68 68 68 68 50 50 50 50 50 50 50 68 43 42 48 48 42 47 48 48 57 57 57
50 50 44 43 36 30 30 39 39 43 47 43 38 50 47 47 47 48 59 59 48 41 41 39 37 21 17 10 10 10 13 18 29 34 43 47 59 41 41 43 43 57 57 43 43 39 35 35 39 40
43 47 47 48 48 57 48 48 54 54 54 57 57 57 54 54 54 54 50 41 42 34 34 41 42 44 24 24 13 22 22 23 27 44 57 57 57 57 57 57 48 48 47 47 47 50 50 47 47 47
57 57 68 68 57 57 57 68 68 68 57 57 50 54 54 57 59 59 57 48 50 57 57 57 57 59 57 57 57 54 54 57 57 57 48 48 42 44 32 32 32 42 44 44 47 48 44 44 43 43
43 59 57 57 57 57 57 57 48 48 48 57 59 59 59 59 54 57 57 59 54 54 47 47 39 39 35 35 35 37 37 43 43 43 43 43 40 43 43 48 48 48 57 48 48 48 43 34 34 23
23 28 28 28 24 24 28 28 32 34 15 12 7 6 8 8 8 8 8 11 11 13 14 9 9 10 9 11 11 16 12 10 10 10 8 10 10 12 12 12 9 8 8 8 8 8 9 13 15 17
9 9 9 8 8 8 8 10 10 10 10 10 10 11 15 13 13 10 10 10 11 12 10 10 10 15 11 10 10 8 8 6 6 3 0 3 8 8 8 10 12 12 14 13 13 11 16 16 23 18
16 13 14 11 11 9 17 9 9 10 8 10 10 10 10 11 9 9 9 9 11 11 11 10 8 6 6 8 10 12 11 11 11 11 11 11 13 15 20 19 21 12 10 8 8 8 8 11 8 8
10 8 12 9 11 11 9 10 17 25 34 32 32 37 39 23 16 11 11 11 16 19 19 20 24 30 28 25 18 10 10 10 13 12 21 25 22 24 24 17 16 10 10 8 8 8 8 8 8 8
8 8 8 8 8 8 9 9 9 13 9 8 8 8 6 6 6 6 6 9 10 8 8 10 9 8 9 8 10 8 8 8 8 11 8 9 16 10 10 10 12 9 8 8 6 7 7 8 8 8
15 8 8 10 8 13 11 11 11 15 12 12 11 12 8 11 6 6 8 8 10 12 9 9 9 10 11 10 10 10 8 8 10 8 8 8 9 9 9 9 9 6 10 7 6 8 8 9 9 11
15 8 8 8 8 8 8 8 8 8 8 11 18 19 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 16 23 23 18 24 10 10 10 9 9 8 11 11 8 8 8 10 10 8 8 8
10 10 9 9 8 8 8 6 6 8 8 8 8 8 8 10 10 9 8 8 10 8 8 8 8 11 10 9 8 8 6 6 10 8 8 9 9 9 9 12 19 13 11 8 8 8 8 8 8 9
12 11 10 10 10 10 9 8 8 7 8 8 8 8 8 12 18 20 23 16 8 8 8 8 8 8 8 8 8 10 8 11 11 12 12 11 11 13 16 10 10 10 11 11 11 10 11 10 8 8
8 8 8 8 8 7 8 10 11 20 13 14 14 10 12 7 7 8 7 12 9 9 11 11 11 13 8 8 6 6 8 8 10 10 8 8 8 8 9 13 18 18 19 16 18 11 11 9 9 8
10 8 8 11 15 8 8 8 10 10 10 10 8 8 6 6 8 10 6 6 8 8 6 6 11 8 8 8 8 8 10 8 11 9 8 8 8 6 6 8 8 8 8 8 10 9 13 9 8 8
8 8 8 8 8 10 12 15 15 8 8 6 6 8 8 11 11 10 10 12 15 10 9 9 12 10 10 10 9 10 10 16 13 11 10 8 10 6 6 10 11 10 12 12 11 11 10 8 8 8
10 9 9 10 9 8 11 11 11 10 10 8 6 6 8 8 8 8 6 6 10 10 12 12 12 9 12 12 22 22 18 18 13 17 9 9 9 13 10 10 13 9 8 8 17 15 13 8 9 9
9 9 9 9 8 10 9 8 8 6 6 8 8 6 6 10 8 11 12 8 8 6 6 8 10 13 14 9 9 9 8 8 10 10 10 8 10 8 8 8 8 8 6 6 9 7 10 7 8 8
8 8 10 10 10 10 12 9 9 9 12 8 8 8 6 8 9 9 9 8 8 10 8 10 8 8 8 11 9 8 8 8 8 8 8 8 8 9 9 10 10 12 9 9 9 9 9 9 15 9
9 9 9 9 10 19 10 12 8 10 10 14 18 12 12 10 10 10 8 13 8 8 8 8 8 8 8 8 8 10 10 10 6 6 8 7 6 10 6 6 8 8 8 8 8 6 8 8 10 8
8 8 8 8 6 6 8 8 10 14 14 14 12 10 10 8 8 10 10 8 8 8 8 6 8 11 15 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 12 12 10 10 6 6 8
8 8 8 8 8 8 8 6 6 8 10 10 10 6 6 8 10 8 8 8 8 10 10 10 11 8 10 8 8 8 10 13 10 12 12 12 11 8 8 8 8 8 8 8 8 8 12 10 15 9
7 8 8 8 8 8 8 8 8 8 8 8 11 8 10 10 8 8 6 6 6 8 10 13 15 9 8 6 6 6 6 8 7 7 10 10 8 7 9 9 12 8 19 17 10 10 8 8 8 8
8 8 8 8 8 8 8 8 9 9 9 9 11 15 15 19 15 11 8 8 8 8 10 8 8 8 15 20 28 12 12 7 7 8 8 8 8 13 13 11 17 11 11 11 9 9 9 11 11 10
14 11 11 16 11 24 16 13 13 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 13 8 10 8 6 8 6 6 13 8 8 8 8 8 8 12 10
9 8 8 8 8 10 10 13 10 10 10 10 12 8 10 8 8 8 8 8 |