Query= MSMg01no095_o12.b1 MSMg01no095_o12.b1 CHROMAT_FILE:
MSMg01no095_o12.b1 PHD_FILE: MSMg01no095_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:04 2005
(274 letters)
>mm_chr19_41577643_41578316
Length = 674
Score = 514 bits (266), Expect = e-150
Identities = 269/270 (99%)
Strand = Plus / Minus
Query: 1 cagaattacagcagttatgaaacctgtccaggtcagtgacagattttaaatgttgtataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cagaattacagcagttatgaaacctgtccaggtcagtgacagattttaaatgttgtataa 411
Query: 61 atgttagaggctattatactgattacttagacatgcagataaatgaacttaaacagccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgttagaggctattatactgattacttagacatgcagataaatgaacttaaacagccaa 351
Query: 121 cagtaaactaaaatactcctgaaagctgagattatatcatgaagaccaagaggatctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cagtaaactaaaatactcctgaaagctgagattatatcatgaagaccaagaggatctaat 291
Query: 181 gaagaatttctagcataataatggcagtgtcaaagatgagacagaatgaaatagacaaga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaagaatttctaacataataatggcagtgtcaaagatgagacagaatgaaatagacaaga 231
Query: 241 accacaaaggatctctaatgatgatgtata 270
||||||||||||||||||||||||||||||
Sbjct: 230 accacaaaggatctctaatgatgatgtata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_o12.g1 MSMg01no095_o12.g1 CHROMAT_FILE:
MSMg01no095_o12.g1 PHD_FILE: MSMg01no095_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:04 2005
(288 letters)
>mm_chr19_41479158_41479845
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 gccagggctacacagtaagacttttcctcaaactacacagacaaggtgcacactccttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gccagggctacacagtaagacttttcctcaaactacacagacaaggtgcacactccttta 261
Query: 61 atcccagcattcaggagacagaggcaggtggatctctgtgagtttgaagccagcctgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atcccagcattcaggagacagaggcaggtggatctctgtgagtttgaagccagcctgctc 321
Query: 121 tgcatagtgagttccaaagcagccaaaatgacacagtgagaccctgcctttaaaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgcatagtgagttccaaagcagccaaaatgacacagtgagaccctgcctttaaaaaaaaa 381
Query: 181 attgtataaagcaactatatgataaatattagaaaggctattgcataaaatgttccatta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 -ttgtataaagcaactatatgataaatattagaaaggctattgcataaaatgttccatta 440
Query: 241 ataaagaagtgtaaccccaagcttatttcagtagatgttatgaa 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaagaagtgtaaccccaagcttatttcagtagatgttatgaa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
