Query= MSMg01no126_o16.b1 MSMg01no126_o16.b1 CHROMAT_FILE:
MSMg01no126_o16.b1 PHD_FILE: MSMg01no126_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:29 2005
(476 letters)
>mm_chr19_61261432_61262307
Length = 876
Score = 882 bits (456), Expect = 0.0
Identities = 468/472 (99%)
Strand = Plus / Plus
Query: 5 gaattctggtctttaacgtgcatccagagatcatgatttcctaataatccaatgtgtttt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggtctttaatgtgcatccagagatcatgatttcctaataatccaatgtgtttt 264
Query: 65 cttagaatcatcattgtattgaatatataaaacatctaaactgatttacagtgtatggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttagaatcatcattgtattgaatatataaaacatctaaactgatttacagtgtatggag 324
Query: 125 gatatgtctgggttctgtgctgtcactacacaattctatgtgcattgagtgtagtttaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatatgtctgggttctgtgctgtcactacacaattctatgtgcattgagtgtagtttaac 384
Query: 185 tccactatattgttgtggctgctcagtattgcttattgaccatctaactcccaggaagta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccactatattgttgtggctgctcagtattgcttattgaccatctaactcccaggaagta 444
Query: 245 cattatacagagaaactaccttttcaatgtattatttcatgaattttgtattaacaaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattatacagagaaactaccttttcaatgtattatttcatgaattttgtattaacaaaca 504
Query: 305 ttaaatttaaaagtattctgtctctgaagtgtgctcagcaattttgtatcagcaaatcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaaatttaaaagtattctgtctctgaagtgtgctcagcaattttgtatcagcaaatcat 564
Query: 365 ggttcacccgcacacattcacagttaacagagtctactattgaaaactgttgtcaagtgt 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggttcagttgcacacattcacagttaacagagtctactattgaaaactgttgtcaagtgt 624
Query: 425 aatgcatatttcttccttcttgttaaatctactacaaatttgttcattatca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgcatatttcttccttcttgttaaatctactacaaatttgttcattatca 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_o16.g1 MSMg01no126_o16.g1 CHROMAT_FILE:
MSMg01no126_o16.g1 PHD_FILE: MSMg01no126_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:29 2005
(342 letters)
>mm_chr11_121808363_121809105
Length = 743
Score = 540 bits (279), Expect = e-158
Identities = 324/339 (95%), Gaps = 2/339 (0%)
Strand = Plus / Minus
Query: 5 aagaa-taggtgaactttattctgattggttggctcagtttccaggtgtatgggtgtctt 63
||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 410 aagaagtaggtgaactttattctgattggttggctcagtttccaggtgaatggatgtctt 351
Query: 64 tgggattggttaaggtcctgggatattttggggaatttccataaccaatgctgactaagt 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgggattggttaagatcctgggatattttggggaatttccataaccaatgctgactaagt 291
Query: 124 attcttggtttaggcttgcctcaggcctggtggcaggtgcagctcctggaagctcctgat 183
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 290 attcttggtttaggcttggctcaggcctgatggcaggtgcagctcctggaagctcctgat 231
Query: 184 tgtctgtgagggtggttttcctagaattgactcatttggacttttccaattctaggaaac 243
|||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 230 tgtctgtgagggtggttttcctagaaatgatttgtttggacttttccaactctaggaaac 171
Query: 244 agcaacttatacctagtctcccaaactgtcagtttgcagcctgtcatgcagtcagcctgg 303
||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 170 agcaacttagacctagtctcccaaactgtcagtttgcagcctgtcatgtagtcagcctg- 112
Query: 304 ctctggccaattcagtcttctcaattttttgaaggagga 342
||||||||||||||||||||||||| |||||||||||||
Sbjct: 111 ctctggccaattcagtcttctcaatcttttgaaggagga 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
