Query= MSMg01no127_i14.b1 MSMg01no127_i14.b1 CHROMAT_FILE:
MSMg01no127_i14.b1 PHD_FILE: MSMg01no127_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(161 letters)
>mm_chr19_16959935_16960495
Length = 561
Score = 255 bits (132), Expect = 8e-73
Identities = 153/160 (95%)
Strand = Plus / Minus
Query: 1 accaactgcccagggactccctcccaatctccaagaagccaaatactgtttgcaggagtg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 accaactgcccagggactctctcccaatctccaagaagccaaatactgtttgcaggagtg 301
Query: 61 caatagtctctcctgaatccagtccaacatttgttattttttcttataggctcacttgga 120
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 300 caatagtctctcctgaatccagtccaacatttgttacagtatcttataggctcacttgga 241
Query: 121 aatgttaccatttaagaagccttgaagttgctctaggcct 160
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 240 aatgcaaccatttaagaagccttgaagttgctctaggcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_i14.g1 MSMg01no127_i14.g1 CHROMAT_FILE:
MSMg01no127_i14.g1 PHD_FILE: MSMg01no127_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(209 letters)
>mm_chr19_16777390_16777994
Length = 605
Score = 335 bits (173), Expect = 2e-96
Identities = 200/209 (95%), Gaps = 4/209 (1%)
Strand = Plus / Plus
Query: 1 tcttattttaatagttatatacactgggtgagcatccttgaaaatacacttggaagtcgt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 201 tcttattttaatagttatatacact-ggtgagcatccttgaaaatacactt-gaagtcgt 258
Query: 61 tcacacattctaataccattatatgaaacaggtagtttaggatatttcgaagaacagaat 120
|||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 259 tcacaccttctaataccattatatgaaacaggcagtttaggatattt-gaagaacagaat 317
Query: 121 atttattttcggagtgagaagaattattagcaacactcctctctcaatcaccccaaaggg 180
||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 318 atttatttt-ggagtgagaagaattattagcaacactcctctcccaaccaccccaaaggt 376
Query: 181 tctttcttccaagaacatcatttacttgg 209
|||||||||||||||||||||||||||||
Sbjct: 377 tctttcttccaagaacatcatttacttgg 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 605
Length adjustment: 9
Effective length of query: 200
Effective length of database: 596
Effective search space: 119200
Effective search space used: 119200
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
