Query= MSMg01no130_p14.b1 MSMg01no130_p14.b1 CHROMAT_FILE:
MSMg01no130_p14.b1 PHD_FILE: MSMg01no130_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:02 2005
(246 letters)
>mm_chr19_18383101_18383746
Length = 646
Score = 427 bits (221), Expect = e-124
Identities = 239/245 (97%)
Strand = Plus / Plus
Query: 1 tggtccttagatagcccagattttgtcagatcccattttgagaaatatttagtcccttag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tggtccttagatagcccagactttgtcagatcccattttgagaaatatttagttagttag 260
Query: 61 tcatatcctaatttcagatcagtaggtatagataagtaggtagaatttgaccaacaaatt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatatcctaatttcagaacagtaggtatagataagtaggtagaatttgaccaacaaatt 320
Query: 121 acctaaattcacccagagtctatagaagccagccattatcagtatttatatatgtttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 acctaaattcacccagagtctatagaagccagccattatcagtatttatatatttttgct 380
Query: 181 ttatgattagagcttgtatgtagcagaagatggcctagtccaacatcattgggagaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgattagagcttgtatgtagcagaagatggcctagtccaacatcattgggagaggcc 440
Query: 241 cttgg 245
|||||
Sbjct: 441 cttgg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_p14.g1 MSMg01no130_p14.g1 CHROMAT_FILE:
MSMg01no130_p14.g1 PHD_FILE: MSMg01no130_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:02 2005
(628 letters)
>mm_chr19_18513760_18514785
Length = 1026
Score = 1191 bits (616), Expect = 0.0
Identities = 625/628 (99%), Gaps = 2/628 (0%)
Strand = Plus / Minus
Query: 1 tcagggacatctgcaaagtacgttagcagaatgtgaagaaacatgtttaccctagaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcagggacatctgcaaagtacgttagcagaatgtgaagaaacatgtttaccctagaaatt 677
Query: 61 tgatgtctgtggcttctaaaatagatacaagatggttagggaagttttcgaataaaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgatgtctgtggcttctaaaatagatacaagatggttagggaagttttcgaataaaggag 617
Query: 121 agaaaacacaggcaagatataaaaggttcagaggaactttcgatgagagagaagatggta 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 616 agaaaacacaggcaagatataaaaggttcagaggaacttttgatgagagagaagatggta 557
Query: 181 aagaatagtagcaggaagatcttagagtaagatgactgattactttagaagagaaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aagaatagtagcaggaagatcttagagtaagatgactgattactttagaagagaaaatga 497
Query: 241 ccctatcacctaatgtttaccagaagttgagaaactccaactcaccttgagtaagcatat 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 496 cccta-cacctaatgtttaccagaagttgagaaactccaactcaccttgagtaag-atat 439
Query: 301 gtgggtcctgaaggtctgttctatggtttttcatcctttagttcatgatacttgctcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgggtcctgaaggtctgttctatggtttttcatcctttagttcatgatacttgctcaat 379
Query: 361 cttagtagagttaggataaactgtgagggaaaaagttcattgttactgcttgtttttaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cttagtagagttaggataaactgtgagggaaaaagttcattgttactgcttgtttttaac 319
Query: 421 tatgaacacaaattcataaaatcagtatttatttctagtgtagatgggtggttggtccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tatgaacacaaattcataaaatcagtatttatttctagtgtagatgggtggttggtccta 259
Query: 481 gccttgtggctttgaagggacagcagattatgctaatagctatatttgttcctttaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gccttgtggctttgaagggacagcagattatgctaatagctatatttgttcctttaagca 199
Query: 541 gtggttctcaaccaagtgggttgtgaccatttggagttcaaatatcaggcatcctgcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtggttctcaaccaagtgggttgtgaccatttggagttcaaatatcaggcatcctgcata 139
Query: 601 tctgataattacgttatgcttcttcata 628
||||||||||||||||||||||||||||
Sbjct: 138 tctgataattacgttatgcttcttcata 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1026
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1016
Effective search space: 627888
Effective search space used: 627888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
