Query= MSMg01no132_p13.b1 MSMg01no132_p13.b1 CHROMAT_FILE:
MSMg01no132_p13.b1 PHD_FILE: MSMg01no132_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:39 2005
(639 letters)
>mm_chr19_45632610_45633644
Length = 1035
Score = 1166 bits (603), Expect = 0.0
Identities = 621/629 (98%), Gaps = 4/629 (0%)
Strand = Plus / Minus
Query: 11 gcaggaaaaggaagggaggtggcttcgaacagttcattatagctctgacctacaactgta 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gcaggaaaaggaagggaggtggcttcgaacagttcattatagctctgacctacaactgta 976
Query: 71 atcccagctcttagaggtcaaggcaggagaatcagaaactcaaggttatcctctgctaca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 atcccagctcttagaggtcaaggcaggagaatcagaaactcaaggttatcctctgctaca 916
Query: 131 tagtcagtttgaggccagcctgggctacatgagaccctatctcaaataatagtgcaataa 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tagtcagtttgaggccagcctgggctacatgagaccctatctcaaataatagtgcaataa 856
Query: 191 aattaataataataataatagctatggtgataccacttgaatatcctctccacaggatgg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 aattaataataataataatagctatggtgataccacttgaatatcctctccacaggatgg 796
Query: 251 ctgagctccctgagagcccacattatgcccgctggcattggacgtgcccgggctgaactc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ctgagctccctgagagcccacattatgcccgctggcattggacgtgcccgggctgaactc 736
Query: 311 tttgagaagcagattatccaccatggcggccaggcgcgctctgcccaggccccaggagtc 370
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 735 tttgagaagcagattatccaccatggcggccaggtgtgctctgcccaggccccaggagtc 676
Query: 371 actcacattgtggtggatgaagacatggactatgagcgggctctccggctcctcaggttg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 actcacattgtggtggatgaagacatggactatgagcgggctctccggctcctcaggttg 616
Query: 431 ccccagctaccccctggtgcccggctggtgaagtccacctggctgagcttgtgcctgcag 490
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 615 ccccagctaccccctggtgcccagctggtgaagtccacctggctgagcttgtgcctgcag 556
Query: 491 gagggaaggctgacagacacggaaggattcagccttcccatgcccaagaggttggcagct 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gagggaaggctgacagacacggaaggattcagccttcccatgcccaagaggttggcagct 496
Query: 551 cttagcctttctcaggtgtttgttgatgatgtttgagtttccatcttgaattattgaaaa 610
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 495 cttagcctttctcaggtgtttgttgatgatgtttgagtttccatcttgagttattgaaaa 436
Query: 611 aaaaaaaaaacactcgtactttttaaatt 639
|||||| |||||||||||||||||||
Sbjct: 435 aaaaaa----cactcgtactttttaaatt 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1035
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1025
Effective search space: 644725
Effective search space used: 644725
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_p13.g1 MSMg01no132_p13.g1 CHROMAT_FILE:
MSMg01no132_p13.g1 PHD_FILE: MSMg01no132_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:39 2005
(634 letters)
>mm_chr19_45503706_45504739
Length = 1034
Score = 1158 bits (599), Expect = 0.0
Identities = 627/639 (98%), Gaps = 5/639 (0%)
Strand = Plus / Plus
Query: 1 tttgaaggttgaactatgttttttcttcatttattctcccattgtcaaaagtaatatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaggttgaactatgttttttcttcatttattctcccattgtcaaaagtaatatttc 260
Query: 61 atacttctggtgaatcagtgaatgaacagacttagataatttgaaaaaaactatccaata 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 atacttctggtgaatcagtgaatgaacagacttagataatttgaagaaaactatccaata 320
Query: 121 acaatccagggtcaggagaggaggcatagtattgtggtggcccctcctatacagcataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaatccagggtcaggagaggaggcatagtattgtggtggcccctcctatacagcataca 380
Query: 181 gatgctctgcattcagaaagaaaccatgacagttaacagtcattccagacatcacacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgctctgcattcagaaagaaaccatgacagttaacagtcattccagacatcacacatt 440
Query: 241 tgcacagagaatagaaaaacatgccgagtctgatttatgggaagtcctcagatttcatac 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcacagagaaaagaaaaacatgccgagtctgatttatgggaagtcctcagatttcatac 500
Query: 301 ctttggctttcttacaactcactgtgctggtcccctctgagttgcattctatatactgaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 501 atttggctttcttacaactcactgtgctggtcccctctgagttggattctgtatactgaa 560
Query: 361 tttggactcttgttcatgaacaaatgcacattttaggctattaaagaccgccattgccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttggactcttgttcatgaacaaatgcacattttaggctattaaagaccgccattgccag 620
Query: 421 ccaactgactgaacattcagtttcaatgg-----acgtctttatctgcggtgcagcgtgt 475
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 ccaactgactgaacattcagtttcaatggtgtctacgtctttatctgcggtgcagcgtgt 680
Query: 476 atttggatgagcatttgactgttgattgcagcgtacccttactttgtaaaagaacggggc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 atttggatgagcatttgactgttgattgcagcgtacccttactttgtaaaagaacggagc 740
Query: 536 aaagttgaagtgctgagtacgatgaacatcaggctagagaaaggttgaaagccaacatat 595
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagttgaagtgctgagtacaatgaacatcaggctagagaaaggttgaaagccaacatat 800
Query: 596 tgatgaatctttggacttaagactaaagtccaattttaa 634
|||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgatgaatctttggacttaagactaaagtccaattttaa 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
