Query= MSMg01no132_p23.b1 MSMg01no132_p23.b1 CHROMAT_FILE:
MSMg01no132_p23.b1 PHD_FILE: MSMg01no132_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:41 2005
(621 letters)
>mm_chr19_46330956_46331977
Length = 1022
Score = 1189 bits (615), Expect = 0.0
Identities = 618/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcctgggatttctggttgcttggaagcagcatgaagccttaaac-tcacaaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ggaattctcctgggatttctggttgcttggaagcagcatgaagccttaaacatcacaaaa 263
Query: 63 tgagcctagaaaacgtgggtcctgctgttatcgtgtgggaaagacccaccatttctgggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgagcctagaaaacgtgggtcctgctgttatcgtgtgggaaagacccaccatttctgggg 323
Query: 123 aaactacagggacctcaagcgagatccttctcccctcccttgtctcagagctggagtaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaactacagggacctcaagcgagatccttctcccctcccttgtctcagagctggagtaga 383
Query: 183 gagcgtgatagtccttgtgtaaatctgaatacatggctatgttggtgggaaaaggtgttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagcgtgatagtccttgtgtaaatctgaatacatggctatgttggtgggaaaaggtgttt 443
Query: 243 catcctgtgagaagtgttgttgttgttgttacataaaagggatcattgcaaagtttagat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catcctgtgagaagtgttgttgttgttgttacataaaagggatcattgcaaagtttagat 503
Query: 303 ctctaggtcgatagtaaggaactagggaccaggacactgggaattttctagaatctgtcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctctaggtcgatagtaaggaactagggaccaggacactgggaattttctagaatctgtcc 563
Query: 363 tttaaaattcaaaatgtaggtgagtttagggaaggagtgtgagctcaagattgcctggcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttaaaattcaaaatgtaggtgagtttagggaaggagtgtgagctcaagattgcctggcc 623
Query: 423 cttaagatacccttgcctttaaaagatgagacaagtaggggataaaggacgtccacgtga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttaagatacccttgcctttaaaagatgagacaagtaggggataaaggacgtccacgtga 683
Query: 483 ccatgacaaggctgtacacgccagaggtgatttcgagcattcagtcactgcggatgaatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccatgacaaggctgtacacgccagaggtgatttcgagcattcagtcactgcggatgaatt 743
Query: 543 aactctgtgagtcagggttccctagcaaggggtctctgtcctatttgattgcattgtctc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aactctgtgagtcagggttccctagcaaggggtctctgtcctatttgattgcattgtctc 803
Query: 603 aattttttgtgtttgcgta 621
|||||||||||||||||||
Sbjct: 804 aattttttgtgtttgcgta 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_p23.g1 MSMg01no132_p23.g1 CHROMAT_FILE:
MSMg01no132_p23.g1 PHD_FILE: MSMg01no132_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:41 2005
(239 letters)
>mm_chr19_46412048_46412685
Length = 638
Score = 427 bits (221), Expect = e-124
Identities = 233/237 (98%), Gaps = 1/237 (0%)
Strand = Plus / Minus
Query: 1 ggagtaccatgacactacgtagttgcccagaagatccctctagccccgcaccccctaata 60
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 436 ggagtaccatgacactacgtaattgcccagaagatccctctagccccgcatcccctaata 377
Query: 61 atgtgtctgaagggtgcaggcgggtacctagtcctttgggaggctcgcaagccatctcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atgtgtctgaagggtgcaggcgggtacctagtcctttgggaggctcgcaagccatctcgg 317
Query: 121 gccagtgaggatgggggttagctgagttagttggctgtagagaaggaagtgattcctgag 180
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gccagtgaggat-ggggatagctgagttagttggctgtagagaaggaagtgattcctgag 258
Query: 181 gagtcgtgtttgtagaggcagagggaaagatgttttgaattgatgtttgaaagatgt 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagtcgtgtttgtagaggcagagggaaagatgttttgaattgatgtttgaaagatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
