Query= MSMg01no139_i23.b1 MSMg01no139_i23.b1 CHROMAT_FILE:
MSMg01no139_i23.b1 PHD_FILE: MSMg01no139_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:00 2005
(407 letters)
>mm_chr19_43044707_43045513
Length = 807
Score = 737 bits (381), Expect = 0.0
Identities = 399/405 (98%)
Strand = Plus / Plus
Query: 1 attaattaaactaacattatatgaagatggggaaactataaagttggggacatttaaaat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 attaattaaactaacattatatgaagatggggaagctataaagttggggacatttaaaat 260
Query: 61 aatgtcaataatctctctatataaccataaaatatgagatattagagaatttacagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgtcaataatctctctatataaccataaaatatgagatattagagaatttacagagaa 320
Query: 121 atattaatagtattaagggagtgttaggaggtgtggctttgtttgagtaggtgtggcctt 180
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattagtggtattaagggagtgttaggaggtgtggctttgtttgagtaggtgtggcctt 380
Query: 181 gttggagaaagtttgtcactgtgggcatgggctttaagaccttcatcctagctccctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttggagaaagtttgtcactgtgggcatgggctttaagaccttcatcctagctccctgga 440
Query: 241 agccagtcttctgtttaccttcataacaagttgttcaaatctcagctcctcctgcgtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccagtcttctgtttaccttcataacaagttgttcaaatctcagctcctcctgcgtcat 500
Query: 301 gccttcctgggtgctaccatcctcccaccttgatgataatggaatggaccactgaacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccttcctgggtgctaccatcctcccaccttgatgataatggaatggaccactgaacctg 560
Query: 361 taaaccagccccaattaaatatcatccttacaagagttgccttgg 405
||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct: 561 taaaccagccccaattaaatatcatccatacaatacttgccttgg 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_i23.g1 MSMg01no139_i23.g1 CHROMAT_FILE:
MSMg01no139_i23.g1 PHD_FILE: MSMg01no139_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:00 2005
(434 letters)
>mm_chr19_43185825_43186657
Length = 833
Score = 710 bits (367), Expect = 0.0
Identities = 391/399 (97%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 36 taccaagccagccaaaaccccagcatggatgtgtgagaggttcatgaaatcccaccacta 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 taccaagccagccaaaaccccagcatggatgtgtgagaggttcatgaaatcccaccacta 774
Query: 96 gatgagaagctactggtaaaatgaagggagaatgagtcttcttcagggacatagcccttg 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gatgagaagctactggtaaaatgaagggagaatgagtcttcttcagggacatagcccttg 714
Query: 156 aaaagctatccatgctccagtagatgtccctagacccatgaacataaggcaacagtgaaa 215
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gaaagctacccatgctccagtagatgtccctagacccatgaacataaggcaacagtgaaa 654
Query: 216 caactcagtgagtttaaaaagttgttcagtttcattttttatggcatttctgtgtgggca 275
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 653 caactcagtgagtttaaaaagttgttcagtttcattttttatggcatttctgcgtgggca 594
Query: 276 aacatgtgtatccaagtctatatgtgttgcttatgcattttggaactttttcttctgtat 335
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aacatgtgtgtccaagtctatatgtgttgcttatgcattttggaactttttcttctgtat 534
Query: 336 aattttgtcacgcgccagcttttatttcattttattattcttatttgaaacaacagtttt 395
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aattttgtcatgtgccagcttttatttcattttattattcttatttgaaacaacagtttt 474
Query: 396 ctaattagatggggagtagatatgggtacggaggggaag 434
|||||| ||||||||||||||||||||| ||||||||||
Sbjct: 473 ctaattcgatggggagtagatatgggta-ggaggggaag 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
