Query= MSMg01no158_m02.b1 MSMg01no158_m02.b1 CHROMAT_FILE:
MSMg01no158_m02.b1 PHD_FILE: MSMg01no158_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:20 2005
(145 letters)
>mm_chr19_16755981_16756525
Length = 545
Score = 240 bits (124), Expect = 3e-68
Identities = 133/136 (97%)
Strand = Plus / Plus
Query: 1 acatacacatacatatacatggaagcaatcactccagggcataaacttgtaaggtttttt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatacacatacatatacatgtaagcaatcactccagggcataaacttgtaaggtttttt 260
Query: 61 ctaaaagctttattgccagtatcattatttataataaagtcaatttaaacagtgataaaa 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaaagctttaaagccagtatcattatttataataaagtcaatttaaacagtgataaaa 320
Query: 121 gattccagaatattct 136
||||||||||||||||
Sbjct: 321 gattccagaatattct 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space: 73569
Effective search space used: 73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_m02.g1 MSMg01no158_m02.g1 CHROMAT_FILE:
MSMg01no158_m02.g1 PHD_FILE: MSMg01no158_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:20 2005
(283 letters)
>mm_chr19_16898700_16899380
Length = 681
Score = 491 bits (254), Expect = e-143
Identities = 276/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 1 tttccttcc-ccacataagtgcaaggaaaatgaactcagtagtccagcctcagtggacag 59
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 571 tttccttccaccacataagtgcaaggaaaatgaactcagtagtccagcctcagtgggcag 512
Query: 60 taccttcatctgctgagccatcttacctgcatcttcttagggctcttataagcactaaga 119
||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 511 taccttcatctgctgagccatctcacctgcatcttcttagagttcttataagcactaaga 452
Query: 120 agtttgaaagtatacagcactaagactggagcgttggacagtgccaacattgaataaatg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agtttgaaagtatacagcactaagactggagcgttggacagtgccaacattgaataaata 392
Query: 180 ttctttcccattgctcttctcataccttactgacagtatcaactatgagctgcagggaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttctttcccattgctcttctcataccttactgacagtatcaactatgagctgcagggaag 332
Query: 240 gttctgacaggggaaaaaaaatatacaattttaaaatagacaac 283
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 331 gttctgacaggggaaaaaa--tatacaattttaaaatagacaac 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 681
Length adjustment: 9
Effective length of query: 274
Effective length of database: 672
Effective search space: 184128
Effective search space used: 184128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
