Query= MSMg01no160_f21.b1 MSMg01no160_f21.b1 CHROMAT_FILE:
MSMg01no160_f21.b1 PHD_FILE: MSMg01no160_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:18 2005
(317 letters)
>mm_chr19_37901203_37901919
Length = 717
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattccaggcaagcctagactacagagaaaggttctgtctcaaacaatattttcatcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcaagcctagactacagagaaaggttctgtctcaaacaatattttcatcaa 264
Query: 65 tgacagactacatatatacaagtagtcccataagagtcccaaggagcatttcctttggcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgacagactacatatatacaagtagtcccataagagtcccaaggagcatttcctttggcc 324
Query: 125 tagtgttgctgtgacattatagcagaaagtgacaagcccgcccattttagaaaagcctag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagtgttgctgtgacattatagcagaaagtgacaagcccgcccattttagaaaagcctag 384
Query: 185 tccatacctacatagtatagaagacttggcaataaacagctctcttcttgccttatgtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccatacctacatagtatagaagacttggcaataaacagctctcttcttgccttatgtat 444
Query: 245 ctgctatgctatctttataacaattattttagagtttactcctttagcctattaaaaaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgctatgctatctttataacaattattttagagtttactcctttagcctattaaaaaat 504
Query: 305 gttaacagatgct 317
|||||||||||||
Sbjct: 505 gttaacagatgct 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_f21.g1 MSMg01no160_f21.g1 CHROMAT_FILE:
MSMg01no160_f21.g1 PHD_FILE: MSMg01no160_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:18 2005
(283 letters)
>mm_chr19_38056395_38057076
Length = 682
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 tcttaaccgctttgatccttggttgcttcatgtgcaggatagaatcacgcatccaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 482 tcttaaccgctttgatccttggttgcttcatgtgcaggatagaatca-gcatccaggagg 424
Query: 61 catgtaaagacatcatggaaccatccaatcaatgattagattagtattcacgttaggacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 catgtaaagacatcatggaaccatccaatcaatgattagattagtattcacgttaggacg 364
Query: 121 gactggatagttggacaagaccgggtcaggtgatttcctgtaaggtgattaatggtccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gactggatagttggacaagaccgggtcaggtgatttcctgtaaggtgattaatggtccca 304
Query: 181 gtttctctggcactaacaatgtggaaactaagaaagtcttgggcaaactgggacatgcta 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 303 gtttctctggcactaacaatgtggaaactaagaaagtcttgggcaaattgggacatgcta 244
Query: 241 gtcaccctgatctcacggtttcttcccaccctgagtctagctc 283
|||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 243 gtcaccctgatctcacggtttcttccaaccccgagtctagctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
