CCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGAGGATCC
GCGGAATTCAGGTTTTCCACATATCTGAGTTTTGTGAAGCCTTTGTTTAA
ACATGTCCTTTGGAGAAGAGCCTCGCATTTTCCATGTGGTGACATTATCA
GTGCCACTTGACATGTTTTGGGAGTATGTGCAGTCGCTTTCTGTAATAGG
ACTCATTTCCAAACCCAAATTTCACGAGCCCATTGATAGTTGTCCAGAGT
AATAATTTCTAGTTATACTCACACTATTTATGAACTGGGCAAGTGGCTCT
GTGGTCCTGTGTTTAAGTATTTTCCCCCTCTGCCGTGTTTCCTCTGATCA
TCCGTTCCTGTAAATGTTGTACTCTCTCTCAGTATGTGCCTGCTTCCGTG
CTTGCTGGCTTGTCCGCAACATCTCTCGACATTTCTAGCTTTCTTGAGAC
TACATGCATTTAATGGATCATTTAGTCTTGAAGTAGCACCACTGTTTTGA
GGGTCTCCCTGGAACATCTCTTGGAATTGGGTTAGCAGAGGAAGTCCCAG
AGGTCTGTTCTGTACCAACTAATAATGAGAGGAAGCCAGAGGGTCCTCTA
CTTCACTCAGCTTGCCCTCCTATTAATTCCAAGGCCAAGGGTTTCTTTAA
GTTGTAAAAAAAAAAAAATGTCAAAAGGGCATTTTTGGCAGGAGAGAGAA
ATGGAAAATATTTTTAAATGCATTTAAAATT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATTTCAGAGTGACAGCCGTGTAACCTTC
CATTGTGTGGCCGCGCCTAATGCATTCAGTCATTTCCATATTCGTGGGCA
TTCACTCCCAGCTTTCTACTCTTGCAAACAATACAACCATAAACACTCGT
GGTTTTATGAATGTATCTTTAAAGACGTGTGCTTTTATTCTGGTTGGACA
AAGTCTTAGGAAAGGAGTGGCCAAGTAGAATGTGATTTACATTTCTAATT
CTAATAGATCCTCACTGATAGATGTCTTTTCCAATGAAGCCTTCTGAGAT
AAAAGGATTTTTCTCGCCCCCCCCCCTCCTTTGGAGGTGGCATTTTGTTT
ACATAGTAGCAACTTCAAAAAATGAAATTGAAAACAAGAATAAATATGTA
GTCTGTAAGGGGTTTCAATAACCTCACAACATATCTGGGGAAAAAAAAAA
CCTTAAGATTTGTTGGAGAGAAAAACAAAGCTTATAGAGCATTACTGAAT
AAAGACCCAAATAAACCAGGACGTACCAAGGTCATGGGTTAAAATAGACT
CTGTGCAAAGACATCACAGCCACTTGAATTCTGAAATATATTCAGAGCAC
AGCCAGTAAGTTAGGTTGAACCAAATTCTTCAAAAGCACTGGAAATAAAA
TTAAGTAAGGTCTAGCAAACCTGGTACCATCCTAATATTTTCAAAAGGT

Query= MSMg01no160_p08.b1 MSMg01no160_p08.b1 CHROMAT_FILE:
MSMg01no160_p08.b1 PHD_FILE: MSMg01no160_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:04 2005
         (606 letters)



>mm_chr19_24213500_24214505
          Length = 1006

 Score = 1065 bits (551), Expect = 0.0
 Identities = 593/607 (97%), Gaps = 2/607 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattttccatgtggtgacattatcagtgccacttgacatgttttgggagtatgtgcagtc 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 806 cattttccatgtggtgacattatcagtgtcacttgacatgttttgggagtatgtgcagtc 747

                                                                       
Query: 61  gctttctgtaataggactcatttccaaacccaaatttcacgagcccattgatagttgtcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gctttctgtaataggactcatttccaaacccaaatttcacgagcccattgatagttgtcc 687

                                                                       
Query: 121 agagtaataatttctagttatactcacactatttatgaactgggcaagtggctctgtggt 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 686 agagtaataatttctagttatactcacactatttatgagctgggcaagtggctctgtggt 627

                                                                       
Query: 181 cctgtgtttaagtattttccccctctgccgtgtttcctctgatcatccgttcctgtaaat 240
           ||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||
Sbjct: 626 cctgtgtttaagtatttt-tccctctgccgtgtttcctctgatcatccgttcctgtcaat 568

                                                                       
Query: 241 gttgtactctctctcagtatgtgcctgcttccgtgcttgctggcttgtccgcaacatctc 300
           |||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||
Sbjct: 567 gttgtactctctctcagtatctgcctgcttccgtgcttgctggcttgtctgtaacatctc 508

                                                                       
Query: 301 tcgacatttctagctttcttgagactacatgcatttaatggatcatttagtcttgaagta 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tagacatttctagctttcttgagactacatgcatttaatggatcatttagtcttgaagta 448

                                                                       
Query: 361 gcaccactgttttgagggtctccctggaacatctcttggaattgggttagcagaggaagt 420
           |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 447 gcaccactgttttgagagtctccctggaacatgtcttggaattgggttagcagaggaagt 388

                                                                       
Query: 421 cccagaggtctgttctgtaccaactaataatgagaggaagccagagggtcctctacttca 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 387 cccagaggtctgttctgtaccaactaataatgagagaaagccagagggtcctctacttca 328

                                                                       
Query: 481 ctcagcttgccctcctattaattccaaggccaagggtttctttaagttgt-aaaaaaaaa 539
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 327 ctcagcttgccctcctattaattccaaggccaagggtttctttaagttgtaaaaaaaaaa 268

                                                                       
Query: 540 aaaatgtcaaaagggcatttttggcaggagagagaaatggaaaatatttttaaatgcatt 599
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 267 aaaatgtcaaaagggcatttttggcaggagagagaaatggaaaatattttaaaatgcatt 208

                  
Query: 600 taaaatt 606
           |||||||
Sbjct: 207 taaaatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)