Query= MSMg01no175_p07.b1 MSMg01no175_p07.b1 CHROMAT_FILE:
MSMg01no175_p07.b1 PHD_FILE: MSMg01no175_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:09 2005
(234 letters)
>mm_chr19_12553474_12554107
Length = 634
Score = 393 bits (203), Expect = e-114
Identities = 227/235 (96%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 1 taaagacttggctacctgctgagaagattttgtagagagactgaataatggggactggaa 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 201 taaagacttggctacctgctgaggagattttgtagagagactgaataacggggactggaa 260
Query: 61 ccttattggtagattaagctactgacatagtgacctgaaggcagccaagaactgtgaagg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttattggtagattaagctactgacatagtgacctgaaggcagccaagaactgtgaag- 319
Query: 121 a-caggaagaaaaggacaagacagaagaggaggtggagaaagaaggacacacgcagaggc 179
| ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 320 agcaggaagaaaaggaccagacagaagaagaggtggagaaagaaggacacaagcagaggc 379
Query: 180 tacatgatatacccatgcaaggcttgccctcagtgatgtactccctctgtcacac 234
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 tacatgatatacccatgcaaggcttgccctcagtgatgtactccctccgtcacac 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no175_p07.g1 MSMg01no175_p07.g1 CHROMAT_FILE:
MSMg01no175_p07.g1 PHD_FILE: MSMg01no175_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:09 2005
(290 letters)
>mm_chr19_12651231_12651920
Length = 690
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Minus
Query: 1 agatgcagataccctacaaagggtttgcagcttggaaactcaaaattattttctacttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agatgcagataccctacaaagggtttgcagcttggaaactcaaaattattttctacttac 431
Query: 61 actgatgttaatatctgctgttggtttaaaatggagatgataaggccaggcaaacaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 actgatgttaatatctgctgttggtttaaaatggagatgataaggccaggcaaacaggca 371
Query: 121 tgaagagaactgagtagtggtctgaaaacaaaagaaattggtaagaaacatcaaaaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgaagagaactgagtagtggtctgaaaacaaaagaaattggtaagaaacatcaaaaagta 311
Query: 181 atatggaaaggttatccaacttagttactgctttaggtcctttgtttgaaatggcacttc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atatggaaagtttatccaacttagttactgctttaggtcctttgtttgaaatggcacttc 251
Query: 241 tccctgctgtctaagcaaaagaggaaaaaatggtttaaatgacatactga 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccctgctgtctaagcaaaagaggaaaaaatggtttaaatgacatactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
