Query= MSMg01no178_h07.b1 MSMg01no178_h07.b1 CHROMAT_FILE:
MSMg01no178_h07.b1 PHD_FILE: MSMg01no178_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:16 2005
(307 letters)
>mm_chr19_4637139_4637845
Length = 707
Score = 559 bits (289), Expect = e-164
Identities = 298/301 (99%)
Strand = Plus / Plus
Query: 5 gaattcactggttacccaagggaagtgctgtagaggcaagaactgtgacttctttactgt 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactggggacccaagggaagtgctgtagaggcaagaactgtgacttctttactgt 264
Query: 65 gctcagttatctctctgggagcttgggaggcagagaagggcctgagatgcttggcatgtg 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 gctcagttatctctctgggagcttggaaggcagagaagggcctgagatgcttggcatgtg 324
Query: 125 agacccatgtcttcccacctaagcaagattcttctcccaagacctttgtctacagcagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agacccatgtcttcccacctaagcaagattcttctcccaagacctttgtctacagcagac 384
Query: 185 gaatattgcagagatccctctgtctcatgactgggttgaaaggattctcttctttgagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatattgcagagatccctctgtctcatgactgggttgaaaggattctcttctttgagat 444
Query: 245 gagtgagaaagcagccatcccattgagcagtgaggctgaggaaggggtgggaagtgtctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagtgagaaagcagccatcccattgagcagtgaggctgaggaaggggtgggaagtgtctg 504
Query: 305 a 305
|
Sbjct: 505 a 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_h07.g1 MSMg01no178_h07.g1 CHROMAT_FILE:
MSMg01no178_h07.g1 PHD_FILE: MSMg01no178_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:16 2005
(467 letters)
>mm_chr19_4793476_4794342
Length = 867
Score = 864 bits (447), Expect = 0.0
Identities = 462/467 (98%)
Strand = Plus / Minus
Query: 1 cgcgtttctagctccaccttcagatggacctcttgcccaatcagccgcttcagtttcact 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 667 cgcgtttctagctccaccttcagatggacctcttgcccaatcagtggcttcagtttcact 608
Query: 61 aggctgggtgctcattggctttcatataaaaggtccaggttactgacgtttccacctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aggctgggtgctcattggctttcatataaaaggtccaggttactgacgtttccacctctt 548
Query: 121 cctggcctctcaggtaattggcgttccgggtaaccaatcaggaagaggatctccgggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cctggcctctcaggtaattggcgttccgggtaaccaatcaggaagaggatctccgggaac 488
Query: 181 gccagccttttactttaccgaacggccaatccggtgggtaggttcacccctctttctacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gccagccttttactttaccgaacggccaatccggtgggtaggttcacccctctttctacc 428
Query: 241 cagagtcactgctgtggccgccgccattttagcgttttgtcataaccgtccgcgctgcaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 427 cagagtcactgctgtggccgccgccattttagcgttttgtcagaaccgtccgcgctgcaa 368
Query: 301 ggaggaggacctgcaggtatccatgcggtgagatactccacgcccttccactgtgttctt 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 367 ggaggaggacctgcaggtatccatgcggtgagatactccacgttcttccactgtgttctt 308
Query: 361 ttctctgttaaaaaaacttacctgactccggtgggtgtcagggttggcatagtggggttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttctctgttaaaaaaacttacctgactccggtgggtgtcagggttggcatagtggggttg 248
Query: 421 cggtctgcgcacccgtccctgagagccgacatcggtcctcgacttag 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cggtctgcgcacccgtccctgagagccgacatcggtcctcgacttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
