Query= MSMg01no182_e11.b1 MSMg01no182_e11.b1 CHROMAT_FILE:
MSMg01no182_e11.b1 PHD_FILE: MSMg01no182_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:58 2005
(232 letters)
>mm_chr19_60827199_60827829
Length = 631
Score = 418 bits (216), Expect = e-121
Identities = 225/228 (98%), Gaps = 1/228 (0%)
Strand = Plus / Minus
Query: 5 gaattctccgtttctctctagggcagagcagataacagatatcttcctgggtgatggggc 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaattctccggttctctctagggcagagcagataacagatatcttcctgggtgatggggc 372
Query: 65 agtttgtccagcctttaagaagctagagatattgttgtgttgggcagtgcattctcacta 124
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 371 agtttgtccaggctttaagaagctagagatattgtt-tgttgggcagtgcattctcacta 313
Query: 125 gcctttctgctagactttgagaaatacctcaaagggatttttcctatccacttccatgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcctttctgctagactttgagaaatacctcaaagggatttttcctatccacttccatgct 253
Query: 185 gtagacttagtaggtaggcccaagtcagagaggcactggaggaatctg 232
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtagacttagtaggtaggcccaagtcagagaggcactggaggaatctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no182_e11.g1 MSMg01no182_e11.g1 CHROMAT_FILE:
MSMg01no182_e11.g1 PHD_FILE: MSMg01no182_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:59 2005
(335 letters)
>mm_chr19_60727136_60727870
Length = 735
Score = 623 bits (322), Expect = 0.0
Identities = 331/334 (99%), Gaps = 2/334 (0%)
Strand = Plus / Plus
Query: 1 caatgtgattaagtaaacttatgcaagtcgtagatttatgtactactgtgctattctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgtgattaagtaaacttatgcaagtcgtagatttatgtactactgtgctattctttg 260
Query: 61 tgatgtccgcactgggggtagggaatcttaagaccc-acggctctgttgatttccgaaga 119
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 261 tgatgtccgcactgggggtagggaatcttaagacccga-ggctctgttgatttccgaaga 319
Query: 120 gattaactcatgggtctccactgtggatgaaagcacgttgggacatttaaaattcaaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gattaactcatgggtctccactgtggatgaaagcacgttgggacatttaaaattcaaagt 379
Query: 180 tgccgtgctctcagttgaagaggagacccaaacagaggataattaggaagaaagaacccg 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtcgtgctctcagttgaagaggagacccaaacagaggataattaggaagaaagaacccg 439
Query: 240 tgatgagtacccgctgtttgtgaatgtgtctatcatcactgtgaaattgaactgtaaatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgatgagtacccgctgtttgtgaatgtgtctatcatcactgtgaaattgaactgtaaatg 499
Query: 300 gtacctggatcagtgggctggaactgccccatgc 333
||||||||||||||||||||||||||||||||||
Sbjct: 500 gtacctggatcagtgggctggaactgccccatgc 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
