TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACACATACACACATGCGCACACACAGACTGACATAAAAAGCATA
CCTGTCACAACAAAAGAAGAAATTCTTGAAATAAATTGTCTAAATATAGC
ATGAGAGGCCCTTCGTATCTGTGCCTCCAGCAACGGGAATGGGCAAGAAC
AGCTTTCACAGGGCATAAGCTCTGATATAGCAAAGTGGCCCTAATGGCAG
AGGCAGTATCCTAGAAAAACAGCCAATTCTCAGATCAACCATAGTACTTT
AAAAAAAAAAAAGATTGACTTTGATTTTATTATGTGTCTGCATGTGGGTA
TATGACCTTGAGTCCAGGTGCCCTCGGAGGCCAGAGGTGTTTGATCCTCT
GGAGCTGAAGTTGCGGGCTGCGAGCCTTCTGACATGCGTGCTGAGAAATC
AGTGTGAATTCTGTTAGAGCAGTGTACACTCTTAACTGCTGAGCTACCTC
TCCAGCCTCTACTGTTTTATTTTTTGAAAACAGAGAGGCACCTAGGGTGC
ACAGTTCTTCCTGTGTCCCCGATGCATAGATTAGGATGTTGCCACCCAAC
GAAAGGGACTCCTATATCAGTATCTCATCCTGCAGACACTCAAATTTGCA
CCTTTTTCTTAATGCTGCATTTTATTAAATTCAACCTTCTGTCTCCCACT
CCTCTTACTATGGTGTTGTATCTTTTTCCAATAAAAATGTGCATCCATTT
A

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATTAGGCCTTTAAGAATGAATAA
CACTGATACTCCACAAAATATTCTTTATAACAGGAAAGGAAGGAACAATT
CAAAATTCATTTTATAAAACTAGTATTACTCTGATACCAAAACCAAAGAC
CCCAAAAAAATAAAACTATAGGCCCATTTCTCTGGAAAAAATTAGATTCA
AAATTTCACAATAAAATAGTTGAAAATCTAATTCAAGATCACTTTAAAGA
TATCACTTATCATGGTCAAATCAGCATTACCCAAAAGATGTAGGGATCAT
CCAACACTTGTAAATTAATCCATTACATAAATAGACTCAAAGACAGAAGC
CACCAAATAGTCATCTGATGGGATGTAGAAGAAACCCTGTGAAAAAATTC
AAAGTGGGAAAAGGGGAACAGGATCAGGAGTGGTGGGTCAGGAGATATAC
TCAGAGGACCAGGAGAATGAATGGAAATATGCAGCTTATGGGGGTGGGAG
GTAAGAGGCTCCCTAGATTTCCCAGAGATTTGGGAGGGACAAAACTCTTT
GGATCCTACGGGGATTGAACTTTTCCATATTGTCCCTACACCGTGCCTCT
GGTCACTTCTAAGTATTTCCCCTTCTATTATATTCTTTTTCCTCATTATT
TTATTGTCGTCAACTTCATCTTTTACTATCGCAACCCTTTTAT

Query= MSMg01no186_k23.b1 MSMg01no186_k23.b1 CHROMAT_FILE:
MSMg01no186_k23.b1 PHD_FILE: MSMg01no186_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:45 2005
         (538 letters)



>mm_chr19_15286297_15287234
          Length = 938

 Score =  951 bits (492), Expect = 0.0
 Identities = 526/544 (96%), Gaps = 12/544 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacacatacacacatgcgcacacacagactgacataaaaagcatacctgtcaca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacacatacacacatgcgcacacacagactgacataaaaagcatacctgtcaca 264

                                                                       
Query: 65  acaaaagaagaaattcttgaaataaattgtctaaatatagcatgagaggcccttcgtatc 124
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 acaaaagaagaaattcttgaaataaattatctaaatatagcatgagaggcccttcgtatc 324

                                                                       
Query: 125 tgtgcctccagcaacgggaatgggcaagaacagctttcacagggcataagctctgatata 184
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgcctccagcaaggggaatgggcaagaacagctttcacagggcataagctctgatata 384

                                                                       
Query: 185 gcaaagtggccctaatggcagaggcagtatcctagaaaaacagccaattctcagatcaac 244
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 gcaaagtggccctaatggcagaggcagtatcctagaaaaactgccaattctcagatcaac 444

                                                                       
Query: 245 catagtacttt----------aaaaaaaaaaaagattgactttgattttattatgtgtct 294
           ||||||||  |          ||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 catagtac--taaaaaaaaaaaaaaaaaaaaaaggttgactttgattttattatgtgtct 502

                                                                       
Query: 295 gcatgtgggtatatgaccttgagtccaggtgccctcggaggccagaggtgtttgatcctc 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcatgtgggtatatgaccttgagtccaggtgccctcggaggccagaggtgtttgatcctc 562

                                                                       
Query: 355 tggagctgaagttgcgggctgcgagccttctgacatgcgtgctgagaaatcagtgtgaat 414
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggagctgaagttgcgggctgtgagccttctgacatgcgtgctgagaaatcagtgtgaat 622

                                                                       
Query: 415 tctgttagagcagtgtacactcttaactgctgagctacctctccagcctctactgtttta 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctgttagagcagtgtacactcttaactgctgagctacctctccagcctctactgtttta 682

                                                                       
Query: 475 ttttttgaaaacagagaggcacctagggtgcacagttcttcctgtgtccccgatgcatag 534
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 683 ttttttgaaaacagagaggcacctagggtgcacagttcttccagtgtccccgatgcatag 742

               
Query: 535 atta 538
           ||||
Sbjct: 743 atta 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)