Query= MSMg01no187_h17.b1 MSMg01no187_h17.b1 CHROMAT_FILE:
MSMg01no187_h17.b1 PHD_FILE: MSMg01no187_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:48 2005
(324 letters)
>mm_chr19_21715004_21715726
Length = 723
Score = 596 bits (308), Expect = e-175
Identities = 317/320 (99%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaattcaagactcccttttttataatgttctgtagacaccggcccattggcca 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattcaaaattcaagactcccttttttataatgttctgtagacactggcccattggcca 264
Query: 65 tgctaaaaaatctgaagctttgaagcatagattggagctggcggaaattttcatcaagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctaaaaaatctgaagctttgaagcatagattggagctggcggaaattttcatcaagag 324
Query: 125 ctcaaagccttactcccaaagacatcctctctttccctacaataacattcttataaagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcaaagccttactcccaaagacatcctctctttccctacaataacattcttataaagca 384
Query: 185 ccagacaggtccttctatctgaagcctagggcttggtcaacgtttgaggaaacttccgtc 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 ccagacaggtccttctatctgaagcc-agggcttggtcaacgtttgaggaaacttccgtc 443
Query: 245 tcaccttcctggacctctggagttagttccttcacacaaactgtagcttagctgcatcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaccttcctggacctctggagttagttccttcacacaaactgtagcttagctgcatcct 503
Query: 305 tcacatcttaagttttgttt 324
|||||||| |||||||||||
Sbjct: 504 tcacatctcaagttttgttt 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_h17.g1 MSMg01no187_h17.g1 CHROMAT_FILE:
MSMg01no187_h17.g1 PHD_FILE: MSMg01no187_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:48 2005
(299 letters)
>mm_chr19_21881105_21881803
Length = 699
Score = 567 bits (293), Expect = e-166
Identities = 296/297 (99%)
Strand = Plus / Minus
Query: 1 tgaagattcgcagtgtgggcatcctcttctcagtcgaaaaactcaaaaaccgtgcccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgaagattcgcagtgtgggcatcctcttctcagtcgaaaaactcaaaaaccgtgcccttc 438
Query: 61 cccatattcacgtgtgccaggaacacgtcacacttgaacagaagtaaccagacacagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cccatattcacgtgtgccaggaacacgtcacacttgaacagaagtaaccagacacagaac 378
Query: 121 aggtttgaaagaaatgtccagtggctttatttggcccgagtcatcagaagtgacaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggtttgaaagaaatgtccagtggctttatttggcccgagtcatcagaagtgacaggact 318
Query: 181 ttggtgcaccgaccatttctgtaccaggaatgaaagtccagtgcctcatccctgtgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttggtgcaccgaccatttctgtaccaggaatgaaagtccagtgcctcatccctgtgcctc 258
Query: 241 tgtgcatgctttattcatttcctctttgaatttataaataatggaaatctatttttc 297
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgtgcatgccttattcatttcctctttgaatttataaataatggaaatctatttttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
