GTTNNNNTTGTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCAGTTCCGGGAGAGAAGGCAGTTCTACCAAGAG
AGTTTCACAGAAACGAGCTGAAGAAAGAACAAGCTTGAAACAAGTGAGTA
CAGAATGAGCCTGAGAATTAGAAGCCAGAAAATTCAAGCAGAATGAAAGA
GTTAGTTCGAGGCCATGCAGAGCAATTCAGCCAGAAGCTGAGAGAAGCCG
GTTTAATCAGTCAGCTTGGTTTCGGCCAGAACAGCTGAGTTAAACCAGCC
AGCCAGAGCTCAGAAAGAACTGGAAGAGGTGTGCTTTTTCAGCAGTCAGC
TTTTCAGACAACAATTAAAACTTTCTATTTTCACCCCCCCCCCTAGTTTC
CATGAAGAACCACTGTCTAGGCAATGCTCTATCTCTATATTGAACTTATA
CAAGTCAGGGAAATGAGCAAGAATCAGCGGGAAAGGTTGTAAGGGAACAG
TTGGTAAGTTAGAGGAAGTAAGCACAGCCAAAGCCAGCAAGCAGCATTTT
GTTAAATATATATTTTATTTGTGTTTTTGAGATTATACTATAATTACATC
ATATATACATATATTTAAACACATATGAACACACATATATTCCTACATTT
AAGCTGCTAATTTTGTATAAATGTTACTTTTATGACCAGCATGAATGAAC
ATCTGTAGCAAACACTGCTGCTACTCCAAGGAATTCTGAAAGCGGGN

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAGAAATATAGAATTTCTCCACTG
CTGACCTGTCCCACAAGGGGAGACTTGCTGTCTTGCCAAACCCTGCAACT
GACTGGGCTTGGGACCTGTGATGGATGAGTTTTGTTATGTGGATGCAATT
ACCACTTTTCATCAGGGCCAAATGACTCCCCTCTTCACACCAGGGAGCCA
CCTGGCTGGAATCTCCTACCTGTTTGACTCCTTGACCTGTTAAAGTTTCT
CCAAGGCACAATTGATGAGTAAAAGTTTCTTTCCTATTGCCTCAGTCAAT
GACATTAAAAAATATTCTCACATCCTACTCGCTAAATATGGGACACGGGG
ACACTTTATTCAAAATGAATTGGTAGACCTATAGGTAAGAAGAAATACAC
ACCCTAAGATAGAACATGAATTAATATAAGAAAGAAAATATACAAAGTGC
CACCAGGAAGTGATTTCACTAATAATATTTATAGGTAATTTGCTTAATCC
ATTTTTATCAAGTTTCTCTTATGTGCGAAGCAAACCATTCAGAAATCAGG
TTTCTAGACACTGTCTAGCCTGTCTTTTGAGGGGAGCCATGAAGAAAATC
TTGATAGCTAGGCAAGAATATGTCTAGACAAACATAGGATGGTTCATATT
GATCAGGACATACTTTCTGAA

Query= MSMg01no189_o09.g1 MSMg01no189_o09.g1 CHROMAT_FILE:
MSMg01no189_o09.g1 PHD_FILE: MSMg01no189_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:59 2005
         (645 letters)



>mm_chr19_35828773_35829812
          Length = 1040

 Score =  998 bits (516), Expect = 0.0
 Identities = 579/602 (96%), Gaps = 5/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 44  gagacttgctgtcttgccaaaccctgcaactgactgggcttgggacctgtgatggatgag 103
           ||||||||||||| ||||||||||||||    |||||| |||||||||||||||||||||
Sbjct: 840 gagacttgctgtcctgccaaaccctgca----actgggtttgggacctgtgatggatgag 785

                                                                       
Query: 104 ttttgttatgtggatgcaattaccacttttcatcagggccaaatgactcccctcttcaca 163
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ttttgttctgtggatgcaattaccacttttcatcagggccaaatgactcccctcttcaca 725

                                                                       
Query: 164 ccagggagccacctggctggaatctcctacctgtttgactccttgacctgttaaagtttc 223
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 724 ccagggagccacctggctggaatctcctacctgcttgactccttgacctgttaaattttc 665

                                                                       
Query: 224 tccaaggcacaattgatgagtaaaagtttctttcctattgcctcagtcaatgacattaaa 283
           ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 664 tccaaggcacaatagatgagtaaaagtttctttcctattgccgcagtcgatgacattaaa 605

                                                                       
Query: 284 aaatattctcacatcctactcgctaaatatgggacacggggacactttattcaaaatgaa 343
           | | || ||||||||||| | | |||||||||||||||||||||||||||||||||||| 
Sbjct: 604 acacatcctcacatccta-ttgttaaatatgggacacggggacactttattcaaaatgag 546

                                                                       
Query: 344 ttggtagacctataggtaagaagaaatacacaccctaagatagaacatgaattaatataa 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttggtagacctataggtaagaagaaatacacaccctaagatagaacatgaattaatataa 486

                                                                       
Query: 404 gaaagaaaatatacaaagtgccaccaggaagtgatttcactaataatatttataggtaat 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaaagaaaatatacaaagtgccaccaggaagtgatttcactaataatatttataggtaat 426

                                                                       
Query: 464 ttgcttaatccatttttatcaagtttctcttatgtgcgaagcaaaccattcagaaatcag 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttgcttaatccatttttatcaagtttctcttatgtgcgaagcaaaccattcagaaatcag 366

                                                                       
Query: 524 gtttctagacactgtctagcctgtcttttgaggggagccatgaagaaaatcttgatagct 583
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 365 gtttctagacactgtctagcctgtcttttgaggggagccatgaagaaaatcttgatggct 306

                                                                       
Query: 584 aggcaagaatatgtctagacaaacataggatggttcatattgatcaggacatactttctg 643
           |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 305 aggcaagaatatttctagacaaatataggatggtccatattgatcaggacatactttctg 246

             
Query: 644 aa 645
           ||
Sbjct: 245 aa 244


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1040
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1030
Effective search space:   654050
Effective search space used:   654050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)