Query= MSMg01no211_k06.b1 MSMg01no211_k06.b1 CHROMAT_FILE:
MSMg01no211_k06.b1 PHD_FILE: MSMg01no211_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:57 2005
(372 letters)
>mm_chr19_14473694_14474464
Length = 771
Score = 408 bits (211), Expect = e-118
Identities = 217/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 17 gaattcctaatgtactcaagactttacaatcccatcttctgtgttttgaaaaacaggtta 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaattcctaatgtactcaagactttacaatcccatcttctgtgttttgaaaaacaggtta 375
Query: 77 ctttttaatttaaaaatgacatcagataactctaacattttgtcaattttacagtctctt 136
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 c-ttttaatttaaaaatgacatcagataactctaacattttgtcaattttacagtctctt 316
Query: 137 tgatccttgaatgttaaagatcctcacctctgaaacccacctctgctaatttctgtgcgc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 315 tgatccttgaatgttaaagatcctcacctctgaaacccacctctgctaatttctgtgggc 256
Query: 197 ttaggagtattgtttgaatgtatttaaatgttgaaactt 235
|||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttaggagtattgtttgaatgtatttaaatgttgaaactt 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_k06.g1 MSMg01no211_k06.g1 CHROMAT_FILE:
MSMg01no211_k06.g1 PHD_FILE: MSMg01no211_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:57 2005
(316 letters)
>mm_chr19_14362579_14363294
Length = 716
Score = 497 bits (257), Expect = e-145
Identities = 302/317 (95%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 1 ctacaaagaccggaaatatttgccgacaacagaaacatatggattagaaagataaaagaa 60
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacaaagacaggaaatatttggagacaacagaaacatatggattagaaagataaaagaa 260
Query: 61 tatttttagaaaatttaaggtggggctggtgaaaattgaaggggattgaagaaaaattta 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tatttttagaaaatttaaggtggggctagtgaaaattgaaggggattgaagaaaaattta 320
Query: 121 atattaaagtatgtattgacaaagagcaccatgggcatgttgaccggatcaataatgctc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 atattaaagtatgtattgacaaagagcaccatgggcatgttgactggatcaataatgctc 380
Query: 181 attctgcagtaaggggcaatacgttcttca-ctcagccattttaggacaaatatcaggct 239
|||||| |||||||||||||| |||||| | || || ||||||||||||| || |||||
Sbjct: 381 attctggagtaaggggcaatatgttctt-agctgagttattttaggacaaacattaggct 439
Query: 240 aatcacccaaatacaatagaaagaagagagaagatgcccagttactcactggcatctgaa 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 aatcacccaaatacaatagaaagaagagagaagatgcacagttactcactggcatctgaa 499
Query: 300 gtctaagacttctgtag 316
|||||||||||||||||
Sbjct: 500 gtctaagacttctgtag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
