CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTTTTTTCCTTTTTTTTGAGACAGGGTCTCGTGTATGTGGAGC
TGTGGGTTGAGCCCAGGGATTTCCGTATGTTAGCAGAGCACTCTACCAAC
TGGGCTGTAGCTCCAGCTCCCAAGAACTTTTTATTGCAGTGTAGAAGTCC
AGGAGAATTTTGTAGCAGTTTTAATATTGGGTCAACCTTGCTATTTGTGG
CAGCTGTGGAAGGCAGGAGCGGCTGTGGCATTCCCAGAATGTGGCTCAGT
CACCTATAGGAAATGTGTTGACTTCTCAAGCTACACCAGTTTCAGTGAGT
GCCACCTTGCCCATACAATTTTCTCTCTTCCTTCAAAAAGCACAGTGAAG
CTGGTATTACAAGCCCTGCCCTTCACATCTGAATATTCATATACTAGTTG
CTCAAGAACTCTTTGTAAACAGACTGGAGAAAAATAAACAAAATCATTCT
GTACTATACTTCCTGTCACAAAATGCACTCACACACTCACGAGCACACAC
ACTTTCATACACATGCACACACATACACACACACACATACTCACATGCAC
ACTCACACCCATACTCACATATGCACATATACACATGCATGCACTCCCAT
GCGTGCACACACACATAAACACACAATTCAAACAGATACACAATTACACA
ATACAAACCAGACACACACACACACCTAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTGACTGAGAGCAAGGCCAAGA
TGAATTCTTCACTTCTCTTCCCATATCTTCTATCTGTAGTGTGTGGTTTC
TGGCTTGTCTGTAGTCTCTATGCATTTAATGTGCCTCTCTTGCCAATGTC
TTATCCTTGCGCCTGCCTGATGCATAACTGTAAGTCCAACTGTTCCCAAC
AAAGGGCTTTTGCTTTGTATTTACTGAACACCAAAGAAAGCATCACATGG
CAGGGGAGTTATGGGGAACACATTACAGAAATCTTTAACAGAGTTTTACA
AGGGATTGAGCTCTGTGCTCCAGCTAATCCCTACTGACCCTTGGGCTCTC
AGTGCTATAAGCAGATGCTCATCAAATGATATCCATATGTTGCTTTCAGG
AGTTATGGCAGGTATTTGCTGTATAAAGTATTTTTATGGTATTTGTTACA
TATGGTTGTTTTTTCAAGCTATTTGCTGTTTTAAGCAAACAAATGTCATA
GCACACACACACATGTATTGCTCTCTGAGTCAGGGGCATGAAAAGGTACA
TAATTTAAGATTAGATCTACATATTACTTTAGGTTATAAAAGCTAATTAC
ATGAGAAATCCAAAGAGAAATCCAAAGATTTGAGTATGGTTGAGTGTTAT
ATTGTTATCTTAAAATCAGTTTAAACAA

Query= MSMg01no232_p17.b1 MSMg01no232_p17.b1 CHROMAT_FILE:
MSMg01no232_p17.b1 PHD_FILE: MSMg01no232_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:36 2005
         (612 letters)



>mm_chr19_17185675_17186686
          Length = 1012

 Score =  992 bits (513), Expect = 0.0
 Identities = 583/607 (96%), Gaps = 8/607 (1%)
 Strand = Plus / Minus

                                                                       
Query: 8   ttctttttttttccttttttttgagacagggtctcgtgtatgtggagctgtgggttgagc 67
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttcttttttttt-tttttttttgagacagggtctcgtgtatgtggagctgtgggttgagc 741

                                                                       
Query: 68  ccagggatttccgtatgttagcagagcactctaccaactgggctgtagctccagctccca 127
           |||||| |||  |||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 740 ccagggctttgtgtatgttagcagagcactctaccaactgggctgtagctccagct-ccg 682

                                                                       
Query: 128 agaactttttattgcagtgtagaagtccaggagaattttgtagcagttttaatattgggt 187
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggactttttattgcagtgtagaagtccaggagaattttgtagcagttttaatattgggt 622

                                                                       
Query: 188 caaccttgctatttgtggcagctgtggaaggcaggagcggctgtggcattcccagaatgt 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaccttgctatttgtggcagctgtggaaggcaggagcggctgtggcattcccagaatgt 562

                                                                       
Query: 248 ggctcagtcacctataggaaatgtgttgacttctcaagctacaccagtttcagtgagtgc 307
           |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctcagtcatctatagggaatgtgttgacttctcaagctacaccagtttcagtgagtgc 502

                                                                       
Query: 308 caccttgcccatacaattttctctcttccttcaaaaagcacagtgaagctggtattacaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttgcccatacaattttctctcttccttcaaaaagcacagtgaagctggtattacaa 442

                                                                       
Query: 368 gccct-gcccttcacatctgaatattcatatactagttgctcaagaactctttgtaaaca 426
           ||||| || | ||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 441 gccctggcac-tcatatctgaatattcatatagtagttgctcaagaaatctttgtaaaca 383

                                                                       
Query: 427 gactggagaaaaataaacaaaatcattctgtactatacttcctgtcacaaaa-tgcactc 485
           ||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||
Sbjct: 382 gactggagaaaaataaacaaaatcattctgtgctatgcttcctgtcacaaaact-cactc 324

                                                                       
Query: 486 acacactcacgagcacacacactttcatacacatgcacacacatacacacacacacatac 545
           |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 323 acacactcacaagcacacacactttcatacacatgcacacacat--acacacacacatac 266

                                                                       
Query: 546 tcacatgcacactcacacccatactcacatatgcacatatacacatgcatgcactcccat 605
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcgcatgcacactcacacccatactcacatatgcacatatacacatgcatgcactcccat 206

                  
Query: 606 gcgtgca 612
           |||||||
Sbjct: 205 gcgtgca 199


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)