CTTCCTCTCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTTACCACTTCCACAAAATAACTACAAAATGGTT
TCAATATTGAAATGTAAAGTTCGTCATGAAACATTGAGTGACATGAGGAC
AGATATGATATCACGAGTATAAATTATGAAATTAATGATTAATAAGCAGA
ATGTCCCTAAAATTAAAAAATACTATGTGAAAGATGGCATGATAAAATGA
TAGACTTAGACACACATTTGGATGTAAATTTTGTAAATAATATAATAACC
TATCATCCAAAATGTGGAAAGGACTCAATCTGTAATGTTGATATTGTATT
AAATATCTTTGCTGATATTACATCAAACATGATATCCTGCTGGCATATAA
GTATAGTAAAATGCTCATATTACTGTAAAACGAATCCACACACCTATGGT
GACTTGATCTTTGACAGTGGAGCTAAAAGCCATCTAGTGGAAAAAAGACA
GCATTTTCAACAAATGGTGCTGGCACAAATGGTGGTTATCATGTAGAAGA
ACGCGAATTGATCCATTCCTTTCTCCTTATACTAAGGTCAAGTCTAAGTG
GATCAAGGAACTCCTCATAATATCAGAGACACTGAAACTTATAGAGGAGA
GAGTGGGGAAAAGCCTCACAGATATAGGAATATGGCAAAAAATCCTGAAT
ATAACAGCCATGCCTTGTGCTGTACAA

NNNNTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAGTTGGGACTGGGACAGA
AACCCAGCCACAAATTCTTAGACCCACAATATTTTCCTGCCTGTAAGATG
TGCAGGGGTAAAGATGGAGCAGAAATTAAGGGAATGGCCAACCAATGACT
GGCCCATGAGACCCATTTCTTGAAAGAAAGCCCACCTCTGACACTATTAG
TAATATTCGACTATACTTGCAGACAGGCATATAATGTAAATGTCATCTAA
GAGGCTAGGCCCAGCAGCGGACAGAAGCGTGCTGCCCCCCTTGTCCTCTT
CTTCCTCAGGGAGGCCAGGCAAAATGCACACAGGCGAAGAACACACCCAG
GAAAAGTTTTGGAGACCTTGCTCACTGTATTCGTGGCATGTGTACTTATG
CCACTGGGTGGTGGTCTGGGCCTTTAAGGCAAGGTTTTGTGTCCGTGTTC
TTTTGGTCAGGGCAACGGTGATAAGAAACTTCATCTACATATTTAGGGGT
GTAGGTCACAGGACAGAAAAACATTGATAACAGCAATGCGTGAAGCCTGA
TAACTGTAAGGGCAGCAAATTCCTGGTAGCATTGCTGCTGGGGAGCTGTC
TATATGGTACTCTTTTAGGACGCGTGAAGTACTCATATTTTTGTTGTCTT
CCTATTTGATGTATCAGAG

Query= MSMg01no260_c06.b1 MSMg01no260_c06.b1 CHROMAT_FILE:
MSMg01no260_c06.b1 PHD_FILE: MSMg01no260_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:09 2005
         (464 letters)



>mm_chr19_51013113_51013976
          Length = 864

 Score =  890 bits (460), Expect = 0.0
 Identities = 463/464 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaataactacaaaatggtttcaatattgaaatgtaaagttcgtcatgaaacattgagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaaataactacaaaatggtttcaatattgaaatgtaaagttcgtcatgaaacattgagtg 488

                                                                       
Query: 61  acatgaggacagatatgatatcacgagtataaattatgaaattaatgattaataagcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 acatgaggacagatatgatatcacgagtataaattatgaaattaatgattaataagcaga 428

                                                                       
Query: 121 atgtccctaaaattaaaaaatactatgtgaaagatggcatgataaaatgatagacttaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgtccctaaaattaaaaaatactatgtgaaagatggcatgataaaatgatagacttaga 368

                                                                       
Query: 181 cacacatttggatgtaaattttgtaaataatataataacctatcatccaaaatgtggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cacacatttggatgtaaattttgtaaataatataataacctatcatccaaaatgtggaaa 308

                                                                       
Query: 241 ggactcaatctgtaatgttgatattgtattaaatatctttgctgatattacatcaaacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggactcaatctgtaatgttgatattgtattaaatatctttgctgatattacatcaaacat 248

                                                                       
Query: 301 gatatcctgctggcatataagtatagtaaaatgctcatattactgtaaaacgaatccaca 360
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 247 gatatcctgctggcatataagtatagtaaaatgctcatattactgtaaaatgaatccaca 188

                                                                       
Query: 361 cacctatggtgacttgatctttgacagtggagctaaaagccatctagtggaaaaaagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cacctatggtgacttgatctttgacagtggagctaaaagccatctagtggaaaaaagaca 128

                                                       
Query: 421 gcattttcaacaaatggtgctggcacaaatggtggttatcatgt 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gcattttcaacaaatggtgctggcacaaatggtggttatcatgt 84


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no260_c06.g1 MSMg01no260_c06.g1 CHROMAT_FILE:
MSMg01no260_c06.g1 PHD_FILE: MSMg01no260_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:09 2005
         (381 letters)



>mm_chr19_50860101_50860881
          Length = 781

 Score =  721 bits (373), Expect = 0.0
 Identities = 379/381 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaagttgggactgggacagaaacccagccacaaattcttagacccacaatattttcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagttgggactgggacagaaacccagccacaaattcttagacccacaatattttcctg 260

                                                                       
Query: 61  cctgtaagatgtgcaggggtaaagatggagcagaaattaagggaatggccaaccaatgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtaagatgtgcaggggtaaagatggagcagaaattaagggaatggccaaccaatgac 320

                                                                       
Query: 121 tggcccatgagacccatttcttgaaagaaagcccacctctgacactattagtaatattcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcccatgagacccatttcttgaaagaaagcccacctctgacactattagtaatattcg 380

                                                                       
Query: 181 actatacttgcagacaggcatataatgtaaatgtcatctaagaggctaggcccagcagcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actatacttgcagacaggcatataatgtaaatgtcatctaagaggctaggcccagcagcg 440

                                                                       
Query: 241 gacagaagcgtgctgccccccttgtcctcttcttcctcagggaggccaggcaaaatgcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagaagcgtgctgccccccttgtcctcttcttcctcagggaggccaggcaaaatgcac 500

                                                                       
Query: 301 acaggcgaagaacacacccaggaaaagttttggagaccttgctcactgtattcgtggcat 360
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 501 acaggcgaagaacacacccaggaaaagttttggagaccttgcttagtgtattcgtggcat 560

                                
Query: 361 gtgtacttatgccactgggtg 381
           |||||||||||||||||||||
Sbjct: 561 gtgtacttatgccactgggtg 581


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space:   287184
Effective search space used:   287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)