Query= MSMg01no261_g06.b1 MSMg01no261_g06.b1 CHROMAT_FILE:
MSMg01no261_g06.b1 PHD_FILE: MSMg01no261_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:46 2005
(448 letters)
>mm_chr19_44511694_44512541
Length = 848
Score = 406 bits (210), Expect = e-117
Identities = 225/230 (97%)
Strand = Plus / Minus
Query: 219 tagacagagtcatacaaggctgatcccaggctaggtcctggctcagagcctctcctactt 278
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 648 tagacagagtcatacaaggctgatcccaggctaggtcctggctcagagcctctcctacat 589
Query: 279 atagacagtcctaggtgaaactctaagataataaataacactgtctcccaaaacaaacag 338
| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 588 agagacagtcctaggtgaaactctaagataataaataaaactgtctcctaaaacaaacag 529
Query: 339 ccattgtttctacacttcagtgtttcctccaccaacaaaaaggccacagccatctctcca 398
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 528 ccattgtttctacacttcagtgtttcctccaccaacaaaaaggccacagccatccctcca 469
Query: 399 agaagacaaagggatggaagctctttcataagtatggtggtgggaggcag 448
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agaagacaaagggatggaagctctttcataagtatggtggtgggaggcag 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_g06.g1 MSMg01no261_g06.g1 CHROMAT_FILE:
MSMg01no261_g06.g1 PHD_FILE: MSMg01no261_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:46 2005
(277 letters)
>mm_chr19_44361950_44362626
Length = 677
Score = 451 bits (233), Expect = e-131
Identities = 263/277 (94%), Gaps = 7/277 (2%)
Strand = Plus / Plus
Query: 1 catttttgaccttgcaccttggaagactgaaatgtaatgttaaaacaaccaccgctgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttttgaccttgcaccttggaagactgaaatgtaatgttaaaacaaccaccgctgtgg 260
Query: 61 tgaccaccattggtgcaagcatttgggaaggaacctgcacactgcattttctccagcctc 120
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaccaccatcggcgcaagcatttgggaaggaacctgcacactgcattttctccagcctc 320
Query: 121 tcagtggcttcaccattgcacaactatctccgttttggatctgagcactgcttccccggc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagtggcttcaccatcgcacaactatctccgttttggatctgagcactgcttccccg-- 378
Query: 181 cccccccccccccccccgcttttccacacacttcattactgacactcaacccccttctgc 240
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 -----ccccccccccctgcttttccacacacttcattactgacactcaacccccttctgc 433
Query: 241 ctccttgtctttatctccacactacactacactggca 277
||||||||| |||||||||||||| | ||||||||||
Sbjct: 434 ctccttgtccttatctccacactatattacactggca 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
